Bombus impatiens (common eastern bumble bee): 100747331
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Entry
100747331 CDS
T04362
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100747331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bim03009
]
100747331
Ribosome biogenesis [BR:
bim03009
]
Eukaryotic type
Pre-60S particles
RNases
100747331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
100747331
NCBI-ProteinID:
XP_003490041
UniProt:
A0A6P3DSA3
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MLPSTGYFKAINCPFYENGACDRPYCHFKHSKREDVGVTTEATETVENHSAGQAEDSKAA
TMVTSDSGVLQQLVTEAVKKVLANRSVTDVDNKLSCQNVVSQVVEELKPTLTTGSSGTVN
NVKATMVEERTNTPAPVNMQPCVYNPTPIAELKKRHIPIISYMPTRKNTVAVKRKSSPDE
IKPWLNMGNESAEPQSVEIKYKPTVIITPEVRDTMQSYIPTCKSDSASLNSSKDGSSNEY
LLKLRETYYPKNKKKREEYVPKKVKTRLKTGDGLNESALDHIETDLNMMDKVLTCSKSTS
DAQSSKISPDSSLDIEPKFSDDEEENSNDCDNTDDHDDTNKNNTAHIDFKTIEQNESYPD
VKKSDYVNNLQDMYFPKIIDSTDRTINKENHNEKILTYSDTLKQETFPSDESSKSSQCEK
GNVSEVDLNKSMVKNVKEYKSKDKNKDKNQRDHSTSHKRYKEKHESSKRSHSSSHSKSKN
KNHLRHKSKESKDKNHDKDRSKYKHQEKDKVQDKDESKHKSKSDRKDNHRSGKHHGHSKS
SSKEHTKNKSDRSSKHLKTHRRLDDTTNEKYVKSKEKKDLTERFRNSLESIRLNSMNDND
EENDDHHSSIISNDIDVTFSMSDSDHDVQEECLKIFQEYQVPEQSRVAEPLKVGSSALHE
KEKEQVEEIGKKRVAHPSAAACVIRQIGVNQQARKFVNPQQKMYERWRLMRDAVAEKTIS
ASSSAPKDVRRNCTEAIGIASNNELKLNGNGRVRIAHVPYAKSLALEKRKVTENVGKLVE
PKAADNYKTAAQTAKSGVRIAHVPQMVPQLIRPEPLQVTTQKFPLNVRQYYVNMMHDVCV
LIYTNAEDAAQRAIKEEYACHERCKALAVYKNSCMLATHRLRKEADQNSSVDNNAIVIPG
SSTVSHETVLAGKTKGSWSVLKTKRSITKFKGPALYGMLKKWIMTEQQLQDNGFPRPHPD
GQKGRAKVYVTNTRNQSVLSKVPNERICSRCGQTYVIDKRGFASRSQNCIYHWGRKFTIR
GESKYSCCQQYGSATGCCDAKTHVWDYTDYENLRGYVRTLPKDTPVEEQGVYALDCEMCY
TTQGLELTRITVIDDDCSVVYETLVNPQNPIIDYNTRFSGITEENMKDVTTTLLDVQATL
LTMFSDKTILVGHSLESDFKALRLLHDTVVDTSVMFPHKNGYPQKRALKNLCSEYLRKII
QNDVGGHDSKEDAVACMELILWKAKEEAKLQ
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttcgactggttactttaaagctataaactgtccattttatgaaaatggagcg
tgcgatagaccttactgtcatttcaagcattcgaaacgagaagatgttggagttaccaca
gaggctacagagacagtggaaaaccattccgcgggtcaagctgaagactctaaagctgct
acaatggtaacatctgattcaggcgttttacaacaattagtaacagaagctgtcaaaaaa
gtcctagctaatcgaagtgtcacagatgtagataataaattgtcttgtcagaatgttgtt
tctcaggtagttgaagaattaaaaccaacattaaccactggatcttctggtacagtaaac
aatgttaaggccactatggtagaagaaagaacaaatacaccagcaccagttaatatgcaa
ccatgcgtttataatccaacaccaattgcagaactaaagaaacgtcacataccgataata
tcctatatgccaactagaaaaaatacagtagctgtgaaacgtaaatcttctccggatgaa
attaaaccttggttaaatatgggcaatgaatctgcagaacctcaaagtgttgaaattaaa
tacaaacctactgtgataatcacacctgaagttcgggatactatgcagagttatatacct
acatgcaaatcagactcagcttcactaaattcatctaaggatggtagttcaaatgaatat
ttacttaaactcagggagacctattatccaaagaataaaaagaaaagggaagaatatgtc
ccaaaaaaagtgaaaacacgactaaaaacgggtgacggattaaacgaatctgcactggat
catattgaaacagatctcaatatgatggataaagtactcacatgctctaaatcaacttct
gatgcacagtctagtaaaatatctccagattcttctttagatatcgaaccaaaattttct
gacgatgaagaagagaatagtaatgattgcgataacactgacgatcatgatgacacaaat
aaaaataatactgcacacattgattttaagactatagaacaaaatgaatcttatcctgat
gtaaaaaaatctgactatgtgaacaatttacaggatatgtattttccaaagataatagat
agcactgatagaactattaacaaagaaaatcataatgaaaaaatattgacatatagcgat
actctgaaacaagaaacgttccctagtgatgagagttctaaatcttcacaatgtgaaaaa
ggaaatgtatcagaggtagatttgaataaaagtatggttaaaaatgtaaaggaatataaa
agcaaggataagaataaagacaaaaatcaaagggatcacagtacatctcataaaaggtat
aaagaaaagcatgagtcaagtaaaaggtcacattccagttcgcatagtaaaagtaaaaac
aaaaatcatttgagacacaaaagcaaagaatcaaaagataagaatcatgataaggatagg
agtaaatacaaacatcaggaaaaggacaaggtccaagataaagatgagagtaaacacaaa
tctaagagtgatagaaaggacaatcataggtctgggaaacatcatgggcattccaagagt
tcttcgaaagagcatactaagaataaaagtgatagaagtagcaaacatttgaaaacgcat
cgtaggttggacgatacaacaaatgaaaaatatgtgaagagtaaggaaaagaaagattta
accgagagattcagaaattctttagaaagcattcgcctgaattccatgaatgacaatgat
gaagagaatgatgatcaccatagtagtatcatcagtaatgatattgatgtaacttttagc
atgtctgattcagaccatgatgtacaagaagagtgtttaaagatatttcaggaataccaa
gtaccagaacaatcaagggtagcagaaccattgaaagtcggatcatctgcattgcacgaa
aaagaaaaggaacaggtagaagaaattggcaagaaaagagtagcacatccttcagcagct
gcatgtgttatcaggcaaattggagttaatcaacaggcgagaaaatttgtaaatccacaa
cagaaaatgtacgaaaggtggcgtctgatgcgcgatgctgtagcagaaaaaacaatttct
gcaagtagtagtgctcccaaggatgtacgtcgtaattgtaccgaagcgataggtatagcg
agtaacaacgaattgaagttaaatgggaatggtcgtgtcagaattgcacacgtaccgtat
gctaaatccttagcactagaaaaaagaaaggtaacagaaaatgtaggaaagttagtggaa
ccgaaagccgcagataattataaaacagctgcacaaacggcgaagagtggtgtacgcata
gctcacgttccacaaatggttcctcagttaattcgtcctgaaccattacaagtaaccacg
cagaaatttcctttaaacgttcgccagtattatgtgaatatgatgcatgacgtatgtgta
ttaatttacacaaatgccgaggatgcagcacaacgtgcgattaaagaagaatatgcttgt
cacgaaagatgcaaagcactagctgtttacaaaaattcctgcatgcttgctacgcataga
ttgagaaaagaggctgatcaaaattcatctgtggataataatgcaatagtaattccaggt
agtagtacagtttctcatgaaacagtgttggctgggaaaactaaaggttcgtggagtgtt
cttaaaacaaaaagatccattacgaaatttaaagggccagctttatatggtatgctaaaa
aaatggataatgacggagcaacaacttcaagataacgggtttcctcgtccacatccagat
ggtcagaagggtcgtgccaaagtctatgtaactaacacacgaaatcaaagtgttctgtca
aaagtgcctaacgaaagaatttgtagtcgatgtggtcaaacctatgtgattgataaacga
ggatttgcttcgcgatcacagaactgtatatatcattgggggagaaaattcacaatcaga
ggtgaaagcaaatacagttgctgtcaacaatatggttctgcaactggttgttgtgacgcg
aagacgcacgtttgggattatacagactacgaaaaccttcgtggttacgtgagaacttta
ccgaaagatacgccggtagaagaacaaggggtatatgcactcgattgtgaaatgtgttat
acaactcaaggattggaactaaccaggataacagtcattgatgatgattgcagtgtagta
tatgagacgctagtgaatccccaaaatcctataatcgattataatacaaggttttctggg
attacggaggaaaatatgaaagacgtgacaacaacgttattagatgtccaagcaacgttg
ttgacaatgttttcagataaaactatattagtgggtcatagtttagaaagcgatttcaaa
gctttaaggcttttgcacgatactgtcgttgatacaagcgtgatgtttccacacaaaaat
ggttatccacaaaagagagcattaaagaatctttgttccgaatatttaaggaagattatt
caaaatgacgttggtggacacgatagcaaagaggatgctgtcgcttgtatggagttaatt
ctttggaaagcaaaggaagaagcaaaattacaataa
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