Bombus impatiens (common eastern bumble bee): 100748179
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Entry
100748179 CDS
T04362
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100748179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bim03041
]
100748179
03009 Ribosome biogenesis [BR:
bim03009
]
100748179
Enzymes [BR:
bim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100748179
Spliceosome [BR:
bim03041
]
Complex A
U1 snRNP components
U1 related factors
100748179
Complex B
100748179
Ribosome biogenesis [BR:
bim03009
]
Eukaryotic type
Pre-60S particles
Helicases
100748179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIA
DUF6505
Motif
Other DBs
NCBI-GeneID:
100748179
NCBI-ProteinID:
XP_012244482
UniProt:
A0A6P3UZD8
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MYNNSYSNRTSYRPRGSRDSSNRNGGGTYWNSQQQQKEKSLKKQVQRRTPGDSLKKPIWD
LAKLPVITKNLYIPHINVLKRSTDEVTKYHIGKEITVKGNNTPSPIQAFEESNFPDYVME
EIRKQGFAEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYILPATVHINNQPRLNRGEG
PIVLILAPTRELAQQIQSVARDFGSSSCIRNTCIFGGSPKGPQARDLERGVEICIATPGR
LIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQ
ALAEDFLSDYIQINIGSLTLAANHNIRQIIEICQEHEKETKLSGLLREIGKDRGSKMIIF
VETKKKVDDITKAIKREGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLDV
EDVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLEEAGQTI
NPQLADLANSIKPAYGKGRQRWSHSRSNKDSSSTGSPRNNSSPISNNWQAQHVQSTQHNN
GNSQERTVVRQQNAYQTNRQNTFQSNYQQHQQQSQQQQHQQHQQQQHQRQSNTYTNSCQT
SNSYQAGYQNANIPRYHGRTGGFQNNRYHNRQNAYSTNQTAGGQSVYSMPPPFMMPSAGG
HTDSGMQSLVNNKFFQTNRPPPNTGACAYQSMGYSQFQAVPPYTYPYPPTPVQQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtataacaacagttattccaatcgtaccagttacagacccaggggaagtagagactct
agcaatcgtaatggaggaggaacatattggaacagccagcagcaacagaaagagaagtca
cttaagaagcaagtccaaagaagaactcctggagattcattgaagaagcctatatgggat
ctggctaaattaccagtgatcacaaagaatttatatattccacatatcaatgttttaaaa
agatcaaccgatgaagttaccaaatatcacattggtaaagaaatcactgtaaaaggaaac
aatactccttctccaattcaagcgttcgaagaaagtaacttcccagattacgtgatggaa
gaaattagaaagcagggctttgctgaaccaacagcaattcaggcacagggctggccaata
gcacttagtggacgcgacttggttggaattgctcagacaggatctggaaaaactctagct
tatattttaccagcaactgtacacattaataatcaaccacgtttgaaccggggagagggg
ccgatcgttttaatacttgccccaacaagagagttagctcagcaaattcaatccgttgct
agggactttggttcctcctcgtgcattcgtaacacttgcattttcggtggttccccgaaa
ggacctcaagctcgcgatttagagcgcggcgttgagatatgtatcgcaactcccggtaga
ctgatcgattttctcgaaaagggaaccacgaacttgcgcagatgcacatatcttgtattg
gatgaggcagatagaatgttggatatgggattcgagccgcaaattcgaaagatcattgaa
cagattagacctgatagacaggtattgatgtggtccgcgacatggcccaaagaagtgcaa
gctttggctgaagatttcctctcagattacattcaaattaacataggttctctgacattg
gctgccaatcacaatattcgtcagatcatagagatttgtcaagagcacgagaaagaaact
aaactttcaggtctattgagagaaattggcaaagatagaggaagcaaaatgattattttt
gttgaaacgaaaaagaaagtggacgacatcaccaaagctattaaacgagaaggttggcca
gctatctctattcatggtgacaaatcacaacctgaaagagattacgtgttatccgagttc
agaaacggaaaaacaatgatccttgttgctaccgatgttgctgctcgtggcttggatgtc
gaagacgtaaagtatgtaattaattttgattatccaaacagttctgaggattatattcac
agaatagggagaaccggacgttgccaaagtgcaggtacagcatatgcttactttacgcct
aataacgctagacaagcgaaggaactgatttctgttctggaagaagctggtcagacgata
aaccctcaactggcagatttagcaaactcaataaaacctgcatatggcaagggccgccaa
cgttggagtcactctcgctctaataaggatagtagttcaactggaagtccgcgaaataat
agcagccctatttcaaacaattggcaagctcaacatgttcaaagtactcaacataataat
ggtaacagtcaagagaggactgttgtacgccaacaaaatgcataccagaccaaccgccag
aatactttccaatctaattatcagcaacaccaacaacagtcacagcagcaacaacaccaa
cagcatcagcagcaacagcatcaacgacaatcgaatacttataccaacagctgtcaaact
agcaatagttaccaagctggctatcagaatgcaaatatacctagataccatggaagaaca
ggtggtttccaaaataatcgttaccataatcgccagaacgcatacagcactaatcaaaca
gctggaggacaaagcgtgtattctatgccacctccgttcatgatgccatctgctggtgga
cacacagattcaggaatgcagagccttgtaaacaataagtttttccagacaaatcgtcca
ccaccgaatactggggcatgcgcataccaatcgatgggatacagccagttccaagctgtg
ccgccgtatacttatccttatccgcctacaccggtacagcagtga
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