Bombus impatiens (common eastern bumble bee): 100748279
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Entry
100748279 CDS
T04362
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03440
Homologous recombination
bim03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100748279
03450 Non-homologous end-joining
100748279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bim03032
]
100748279
03400 DNA repair and recombination proteins [BR:
bim03400
]
100748279
DNA replication proteins [BR:
bim03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
100748279
DNA repair and recombination proteins [BR:
bim03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
100748279
BRCA1-C complex
100748279
NHEJ (non-homologous end-joining)
MRX complex
100748279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
Rad50_zn_hook
SbcC_Walker_B
AAA_21
SMC_N
AAA_29
COG3_N
AAA_16
AAA_13
ABC_tran
AAA_22
Motif
Other DBs
NCBI-GeneID:
100748279
NCBI-ProteinID:
XP_003486295
UniProt:
A0A6P3DRN7
LinkDB
All DBs
Position
Unknown
AA seq
1387 aa
AA seq
DB search
MSRIRRLSIRGIRNFGDLNDEAKIRFSRPLTLILGPNGTGKTTIIEALKFATCGEFPPGS
DRGKFFIHDPTLSAAPSIRGVVKAEIIDAAGNMYIICRTIESTKGNVSVKFKTLDNALSR
IMKGQNKPVSISNKCANVDAELTLAMGVSKPILDYVIFCHQEDLNWPFQDGKKLKEKFDE
IFDSARFNKALENIMKYIKDMNQKMHILKEQKQNCQLIVNEVVDKEAKFEDNKKRLEDSK
AKIEEFDKELEPVQQKIKIFEKLDADYKNLQNEEKRKKAEYDMFKQQLNRLEEDLQYVFE
GTKEELLKQIESHDEELIRQTDKIEELEKRLKNIAGKESSISSDLSNERVSNGSLRQQIK
DQERKVNLRNAILNEILSSWNLDNIDANVSELEIMALTSRLTEKMEELRHCVEQKRLKRE
EEENALHRAIDSLRSKHSKVESEKNLKESEVTQTKEEINKIKLDIVQLGAAASKLSSIEL
RIQEVQKKVQELNEAMDVNVVKKEVANKIKIRNEMETLLNTVDEEITLLSKQSMQQAELD
LHKSTLHAKEKEIEELKNKREKEIMTLFDIKELSQTKLKTNLDVVQKQLANEMESINQEI
QAEERRITTLETTISHIEHELQNKKREINSDKEKVSSVCHYKSFDETLLLQSKKVKDLQD
KRGMYAHQSVAYKEYMKQLRETNPSCPLCHRDFDERENVVTLLKEMESEMENHPNRLKEC
ERELKTQQEKYDKMLQLKPVVEKIIQLEESDLEKLMNSLEKSKNKLSISRTTVMGLETKK
SCPKKKLAICKDIVGDIMLWDTYIDDIFKLKQTIDNLQIRMTAAGIKTKRSLEEAQSQRE
ELKMSLKNIRDNIEELQSKINMHNEKLNNARQEQNTLQEEQLRIQSDIQKVKELKEKLET
LYSKEISLWKSINMLKKQVAIAETELNSELEKLEEKRKDNSAKLECDRKLVTDAVRRLSE
LQRIQDEVDISIYSNVPESLESSEKKIKDYEKLLNELLCEKSDIETTINKLKENVTRQEV
RKRELSDNLALLQVQETIKNLQQQYLRIKEKLNAINHSQVLNDWKNVQSREQTILRQQNI
IKGNQEELERTLQQYTQELKKDIYRQARKNYKSKCIELTVIEEAILNLKAYSKALDVAMI
QYHEERMATVNRIIKQMWKLVYTGKDTTSIEIHTDATEGIGSTRRTYNYKLVQMKHGHEI
DMKGRCSAGQKVLASIIIRLALAETFCKDCGILALDEPTTNLDQENADSLAEALATVVKL
RSQHQKNFQLIVISHDEKFLFKLAELNSNKGFYQLYRKQTGYTAIRHCLVNSQDCIASDP
IKQESDEEESSNEEREERFILQDKLHETTSQRKAPNEQTHKKRIRISDDDADPPTESATS
KKRYIFQ
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaataagaagactttctattcgtggtattcgtaattttggcgatctgaatgac
gaagctaagattcgattttctcgtcctttgacacttattcttggtccaaatggtactgga
aaaacgacaattatcgaagctctaaaatttgctacttgcggtgaatttccacctggttca
gatcgaggaaaattctttattcatgatccaactctatcggcggcaccatcgatccgaggt
gttgtaaaagctgaaataattgatgcagcaggtaatatgtacataatatgtagaacgata
gagtcaacaaaaggaaatgtgtcagtgaaatttaaaactctcgataatgctttaagcaga
ataatgaaaggtcaaaataagccagtatcaatatctaataaatgtgctaatgttgatgca
gaacttacattagcaatgggagtttcaaaacccattttggattatgtgatcttttgtcac
caagaagacctcaattggcctttccaagatggtaaaaaattaaaagaaaaatttgatgag
atttttgatagtgctagatttaataaagctcttgaaaacattatgaaatatatcaaagat
atgaatcaaaagatgcatatattgaaagagcaaaaacaaaattgccaacttattgttaat
gaagtagtagataaagaagcaaagtttgaagataataaaaaacgattggaagattccaaa
gccaaaattgaggaatttgataaagaattagaacctgtgcagcagaaaattaaaatattt
gaaaaattagatgctgattacaaaaatctgcaaaatgaagaaaaaagaaaaaaagcagaa
tatgacatgttcaaacaacaactgaatagattagaagaagatttacaatatgtgtttgaa
gggactaaagaagaattattaaagcagatagaatcgcatgatgaagaattaataagacaa
actgacaaaatagaagagcttgaaaaaagattaaaaaatattgctggaaaagagtctagc
atatcaagtgatttatctaatgaaagagtgtccaatggttctttaagacaacaaattaaa
gatcaagaaaggaaggttaatcttcgcaatgcaatattaaatgaaatattatcttcttgg
aatcttgataacattgatgcaaatgtatcagaattagaaataatggcccttactagccgg
ctaactgaaaagatggaagaactacggcattgcgtagaacagaaaagattgaaaagagaa
gaagaagaaaatgcattacacagagcaatcgattctttacgtagcaaacattcaaaagta
gaatcagaaaaaaatcttaaagaaagtgaagtaacacaaacaaaagaagaaattaataaa
ataaaattggatattgtgcagcttggcgcagcagcaagtaaactaagttccattgagtta
agaatacaagaagtacagaaaaaagttcaggaattaaatgaagcaatggatgtgaatgtt
gtaaaaaaagaagttgctaacaaaattaagattcggaatgaaatggaaacacttttaaat
acggttgatgaagaaataactttattatcgaaacagagtatgcagcaagctgaattagat
ttacataaatctacattgcatgctaaagaaaaagaaatagaagaattaaagaacaaacgt
gaaaaagaaataatgactttgtttgatattaaagaactatcccaaactaaattaaaaact
aatctagatgtggttcaaaaacaattggcgaatgaaatggaatctattaaccaagaaatt
caggcagaagaacgtcgaataactacattagaaacaacaatatcacatattgaacatgag
cttcaaaataaaaaaagagaaataaattcggataaagaaaaagtttcatcagtttgtcac
tacaaaagttttgatgagactttattattacaatcgaaaaaagtaaaagatcttcaagac
aaaaggggaatgtatgctcatcaaagtgtagcttataaagagtatatgaaacaattaaga
gaaacaaatccttcttgtcctctatgccatagagattttgatgaacgtgaaaatgttgta
actttattaaaagaaatggaaagtgaaatggaaaatcatccaaatcgcttgaaggaatgt
gaaagagaattgaaaacacaacaggaaaaatatgataaaatgttgcaattaaaaccggtc
gttgaaaaaataatacaattagaagagagtgacttagaaaaattaatgaatagtttagaa
aaatcaaaaaataagttgagtatatctcgaacaactgtaatgggattagaaacgaaaaaa
tcttgtcctaaaaaaaaattagcaatatgcaaagatatcgtaggtgatattatgttatgg
gatacatacattgatgacattttcaaactgaaacaaacaattgataacttacagattcgt
atgactgctgcaggcattaagaccaaacgtagccttgaggaagctcaaagtcaaagagaa
gagttgaaaatgtctttaaaaaatattcgcgataatattgaagaattacaatctaaaata
aatatgcataatgaaaaattaaataatgctcgacaagaacaaaatacattacaggaggag
caattaagaatccaatcagatatacaaaaagtaaaagaattgaaggaaaaactggaaacc
ttgtactcaaaagaaatttctctttggaaatcaattaatatgttgaagaaacaagtagct
atagcagaaaccgaattaaattcagagcttgagaaattagaagaaaagaggaaagataat
tcggcgaaactggaatgtgatagaaaattggtaacagatgcagttagacgtttatctgaa
ttacaaagaatacaggatgaggttgatatttccatatacagtaatgttcccgaatcttta
gaaagctctgaaaagaaaataaaagattatgaaaagttgcttaatgaactgctttgtgaa
aaaagtgatatagaaacaacgattaataaattaaaggaaaatgttactcgtcaagaagtt
cgaaaaagggagttgtcagataatcttgcactgctgcaagttcaggaaacaatcaaaaat
ttacaacaacaatatttaagaataaaggagaaattaaatgctataaatcattctcaagta
cttaacgactggaagaatgtacaaagtagagaacaaactatactccgtcagcaaaatata
attaagggaaatcaagaagaattggaaagaacactgcagcaatatacgcaagaactaaaa
aaggatatatatagacaagctcgtaaaaattataaaagcaaatgcatcgaattaacggtt
atagaagaagctatattaaacttaaaagcatatagcaaagcattggatgtggctatgata
caatatcatgaagagcgtatggccacagttaatagaatcattaaacagatgtggaaactt
gtatatactggaaaagatacaacatcaatagaaattcatacagacgcaaccgaagggata
ggtagcacaagaagaacatataattacaaattagttcaaatgaaacatggtcatgaaata
gatatgaaaggtcgttgtagtgctggtcaaaaagttctagcgtcgataattataagactc
gctttagcagaaacattttgtaaagattgcgggattcttgcattggatgaaccaacaaca
aatttggatcaagaaaatgctgatagtctagcagaagcgttggctacggttgtcaaattg
cgatcacaacatcagaaaaattttcagttaattgtaattagtcatgatgagaaattttta
ttcaaattagctgaattaaacagtaataaaggattttatcaactttaccgtaagcaaacc
ggttacacagcaattagacattgtctagtgaacagtcaagattgtattgcgtcagatcct
ataaaacaagaatctgatgaagaggagtcgtctaatgaagaaagagaagaacgtttcatc
ttacaagataaattacatgaaacaacttcgcaaagaaaagcgcctaacgagcaaacacat
aagaaaagaatacgtatttcggatgatgatgctgatcctcctactgaaagcgcaacatca
aaaaaaagatatatatttcaataa
DBGET
integrated database retrieval system
