Bombus impatiens (common eastern bumble bee): 100748363
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Entry
100748363 CDS
T04362
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03013
Nucleocytoplasmic transport
bim03015
mRNA surveillance pathway
bim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100748363
09122 Translation
03013 Nucleocytoplasmic transport
100748363
03015 mRNA surveillance pathway
100748363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bim03019
]
100748363
03041 Spliceosome [BR:
bim03041
]
100748363
Enzymes [BR:
bim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100748363
Messenger RNA biogenesis [BR:
bim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100748363
Spliceosome [BR:
bim03041
]
Complex C
Other components
EJC/TREX
100748363
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100748363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100748363
NCBI-ProteinID:
XP_012239979
UniProt:
A0A6P8KYT9
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQLVDGSRDTPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIIDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNVCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcggataatgatgacctcctggattacgaagatgaagaacagactgaacaattagtt
gatggaagtagggatacacctgctaaaaaagaagtgaagggcacatatgtatccattcac
agtagtggatttagggattttcttcttaaaccagaaatattacgtgcaattattgattgt
ggttttgaacatccatctgaagtacaacatgaatgcattccccaagcagtacttggtatg
gatatattatgtcaagcaaaatctggcatgggaaaaacagctgtatttgtgctagctaca
ttacaacaattagaattaacagagaaccaggtctatgtccttgtcatgtgtcatacacga
gaacttgctttccaaattagcaaagaatatgaacgatttagcaaatatatgcctcatgtg
aaagtcggtgtattttttggtggtttaccaattcaaaaagatgaagaagtcctaaagaac
gtatgtcctcatattgttgttggtacaccaggtcgtatccttgctcttgttcgaaataaa
aaattaaatctgaaacacttgaagcactttatactcgatgaatgtgataaaatgctcgag
ctattagacatgcgcagggacgtacaggaaatatttagaagcactccacacggtaaacaa
gtcatgatgttcagcgctacattgtccaaggagatacgtcctgtctgcaaaaagttcatg
caagatcccatggaagtctatgtggatgatgaagcgaaactcacgttgcacggtctacaa
caacattatgtgaaactaaaagagaatgaaaagaacaagaagctatttgaattacttgat
gtacttgaatttaatcaggtcgttatctttgtaaaatctgtacaaaggtgtatggctttg
gcacaacttctaacagaacaaaattttcctgcgattggtatacacagaggtatgactcag
gaagaacggctatcaaggtaccaacaatttaaagatttccaaaagcgaattttggtagct
acaaatttatttggacgtggtatggatattgagcgtgtaaacatagtgtttaattacgat
atgccagaagattcggacacatacctacatcgagtagccagagctggtcgtttcggtacc
aagggtcttgctattacattagtcagtgatgaaagtgatgctaagatactgaacgatgtt
caagaacggtttgatgttaatattacagagttaccagatgagatagatctagcttcatac
attgaaggacgataa
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integrated database retrieval system
