Bombus impatiens (common eastern bumble bee): 100748905
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Entry
100748905 CDS
T04362
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03008
Ribosome biogenesis in eukaryotes
bim03013
Nucleocytoplasmic transport
bim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100748905
03015 mRNA surveillance pathway
100748905
03008 Ribosome biogenesis in eukaryotes
100748905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bim03019
]
100748905
03009 Ribosome biogenesis [BR:
bim03009
]
100748905
Messenger RNA biogenesis [BR:
bim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100748905
mRNA cycle factors
Stress granule specific factors
100748905
Ribosome biogenesis [BR:
bim03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100748905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
UBA_8
LRR_8
UBA_4
NTF2
LRR_4
CAND6-7_N
Motif
Other DBs
NCBI-GeneID:
100748905
NCBI-ProteinID:
XP_003493850
UniProt:
A0A6P3DWW5
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MQRTSLPIVPMQLDSSIAIKISMGGSMFQERTLMGRSDVWHKVKILKGTQYSKENVLKAI
LSAIEPAELIPVKYQASGEDTFFLARNCAHALDKLCKTNLVIKNPDGDPLILIVTLGFAS
IQDLKLNIQPLIVTALTKMYNSNRKTLDLSEFHKDSEMSNTVYCPLSQQRTFCHVLKLTK
TSIAKVEHLNLQKNELFNLTPIETSGLTSIKYLDLRYNNFISMEALTPLKNLCILKLWLD
GNPLCENYSSSKQYIDSAMKYCPNLFQLDGVYIRTSGLPLTYTNYFRNESREGLVTKFVN
HFFALYDQRDRTVLRGLYCKNAFYSMSLAIPAAVAHKRNLVQFTASRNLLKNVDSNKKRQ
QHLYYGQDNILVGLKRLPRSYHDRNSFVLDIMYDDGKCLAISVCGLLRTISTASQILWFN
RTFIIQAGPDHEYNIINDQYLIDSTIQEIPPSSIEGRFHDDVVPSCFSVSEKEELLAKFV
ETTRLNIDWCQTYLEEAKWDIRKAISNFMKDYKSSAVPNEAFQK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgaacaagtttgccaattgtgccaatgcaactggattcctccattgctataaaa
ataagcatggggggatctatgttccaagaaaggacattaatgggtcgttcagatgtgtgg
cacaaagttaaaattctgaaaggaactcaatacagcaaagaaaatgtattgaaagccata
ttgagtgctatcgaaccagcagaattgatccctgttaagtaccaagccagtggagaagat
accttttttttggcacgtaattgtgctcatgctctggacaagctatgcaagactaactta
gtaattaaaaatccagatggagatccactgatcttgattgtaactttaggatttgcatcc
attcaagatctgaaactcaatattcagccattgatcgtaactgctttgaccaagatgtac
aattctaatagaaaaactttagacttgtcagagtttcataaagactctgaaatgtctaac
accgtatattgtcctttatctcaacagagaactttttgtcatgttttaaaattaacaaag
acttcaattgccaaggtagagcacctgaatcttcaaaaaaacgaactgttcaacctgact
cctatagaaacttctggtttgacatccataaagtatctggatttaaggtacaataacttt
atatctatggaagcactcactcctttaaaaaatctgtgtatactgaagttatggttagat
ggaaatcctctctgtgaaaattattctagttctaaacagtacatagactctgctatgaaa
tactgtcccaatttgtttcaattggatggcgtttacattagaacatctggcctaccactc
acgtatactaattactttagaaatgaatctagggaagggttagtcaccaaattcgtcaac
cactttttcgctctgtacgatcagagggatagaacagtcctgaggggattatattgtaaa
aatgcgttttattccatgagcttggcgattccagcagctgtggctcataaacggaacctc
gttcaatttacagcgagtagaaatttattaaaaaatgtagattcaaataagaaacggcaa
cagcatctttattacggacaagataatattttagttggtctaaagagattaccacgatcc
tatcacgatagaaattcttttgtattagatataatgtatgacgatggcaaatgcttagca
atctccgtttgcggactattgaggaccattagcaccgcatcgcaaattctatggttcaac
agaacgttcattattcaagctggtcctgatcacgaatacaatattataaatgatcagtac
ctaatagattctactatacaagaaattccaccaagtagtatagaaggaagatttcacgac
gacgtcgttccatcgtgctttagtgtaagcgagaaagaagagttactagccaaatttgta
gaaacgaccaggttaaacatcgattggtgtcagacttatttagaagaagctaagtgggac
ataagaaaagcaatttctaattttatgaaggactataaatcttccgccgttcctaacgaa
gcatttcaaaaataa
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