Bombus impatiens (common eastern bumble bee): 100749366
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Entry
100749366 CDS
T04362
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100749366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bim03019
]
100749366
Messenger RNA biogenesis [BR:
bim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100749366
mRNA degradation factors
3'-5' decay
Pan complex
100749366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
100749366
NCBI-ProteinID:
XP_003491713
UniProt:
A0A6P3UZK7
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MDPSMFVPYTPQTNGVPLESKLATYMNRQNSAIALGTTVVTKHLSNLSLDSQKKVTASPE
FVPGRTLTGSNNNSPNLFNNSYHSQENVGGTTYFYLGNAAADAVGTEEGTETIGNVGAGQ
IGYVYPGTPAHLQPVKPTKPVSSNSSSAPSTPPPQATTGFFVSESLRMDIVQKNALTLAQ
PDVVRFPDLPNEVDNYHELCPLEPIHKPASTMLGYQTSTYKATSIKSGTRYCLRRVHDFR
LANTKCMMLVDMWKRISHTNLVQLREVFTTKAFGDHSMVFVYDYHPGSETLLNKHFSSTE
VNGYTDPFSSDPNAPRPYSHTKNTILRQQHSSMLSESVIWSYIIQLTAALRVVHAAGLAY
RCLDPTKVLLTSQTRLRLSCVAIPDVVTFDGNAANPLSLIAHYQQEDLIALGKLVLALAC
RSLLSVHRDNMQASLELVARSYSADLRNLILYLLSNQARRSVTDLMPMIGARFYTQLDAA
QLKSDILENELAKELENGRLFKLLVKLSTINERPDLNMEPTWAETGDRYMLKLFRDYVFH
QVAADGRPWLDMAHVISCLNKLDSGSQDKVCLMSRDEQSILVVSYAELRQCLETSFGELV
QSTKEVV
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggacccatcaatgtttgttccatacactcctcaaacaaacggcgtcccattggaatcc
aagcttgctacctacatgaatcgtcaaaattcagcgatagctttaggcactacagttgtt
acgaaacatctgtcaaacctttctctggattcacagaaaaaggtaactgccagcccagaa
tttgtacctggaagaactcttactggtagtaataataattctccgaaccttttcaataat
tcttatcactcacaggagaatgtgggtggtactacatatttctaccttgggaatgcagca
gctgatgctgttggaactgaggaaggaactgaaactattggaaatgtaggagcaggtcag
ataggctatgtctatccaggtacacctgcgcacctccaaccagtaaaacctacaaaacct
gtgtcatctaatagttcttcagctccctcaacccctccccctcaagcaaccaccggtttt
tttgtcagtgagagtttgagaatggatattgtccaaaaaaatgctttaacgttagcacaa
cctgatgtagtacgatttcccgatctaccaaacgaggtagataattatcatgagttgtgt
ccattggaaccaattcacaaacctgcttcaacgatgctgggatatcaaacttctacgtac
aaagctaccagcattaaaagcggtacacgttactgtctgcgacgtgtacatgatttcaga
cttgctaatacaaagtgtatgatgctggtagatatgtggaagcgaatatcacatacaaat
ttagtgcagttaagagaagtttttaccaccaaggcttttggtgaccattccatggtattt
gtttacgattatcatccggggtcagaaaccctattaaataagcatttttcatctaccgag
gtaaatggttatacggatccattttcctcggaccctaatgctcctcgtccttatagtcat
acgaagaatacaattttgagacaacagcatagtagtatgctatcagaaagcgtcatatgg
agctatattattcagttaactgccgcactccgtgttgtacacgctgctggtttggcatac
agatgtttagatcctacaaaagtgttacttacatcacaaacaagactacgtttaagttgt
gtagctataccagatgttgttacttttgatggaaatgcagcgaatccactttcgcttata
gcgcactatcagcaagaagatttaatcgccttaggaaagttggtgttggcattagcatgt
cgcagtctcctttccgtccatcgcgacaacatgcaagcctccctcgagctcgtcgcacgt
tcctactctgcggatcttcgaaatcttattctgtatttactttcgaatcaagcacgaaga
agtgtaacagatctcatgccgatgattggagcacgattttatacgcaattagatgcagct
cagcttaaatctgatatattggagaatgaacttgccaaggaattagaaaatggaagatta
tttaaattactagtaaagttgagtactattaacgaaagacccgaccttaatatggaacct
acgtgggcagagacgggcgaccgatacatgctcaaattgtttagagattatgtcttccat
caggtagcagctgatggaagaccttggttggatatggcacatgttatatcttgtttaaat
aagttggattctggctcacaagataaggtatgtttgatgtcacgagatgaacagagtata
ttagtagtaagttatgcagaactacgacaatgcttagagacctcatttggagagctggta
caatccacaaaagaagttgtttag
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