Bombus impatiens (common eastern bumble bee): 100749479
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Entry
100749479 CDS
T04362
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100749479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bim03021
]
100749479
03019 Messenger RNA biogenesis [BR:
bim03019
]
100749479
Transcription machinery [BR:
bim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100749479
RNA polymerase I system
100749479
Messenger RNA biogenesis [BR:
bim03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
100749479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW7_SPT5
KOW2_Spt5
KOW6_SPT5
KOW
Spt5-NGN
KOW5_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
CTD
GPKOW_C
SH3_KIN17_C
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
100749479
NCBI-ProteinID:
XP_003490220
UniProt:
A0A6P3DXZ9
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MSDSEASNLSDNESDRGVGGSESDQEENHSVKSAAGSDGGNAGERSRSVSRSRSPSRSRS
RSPRRWRSRSRSASGSEDGRGDEAEEARSGDEEMVEPEEEPEGEDLEGSSEYDEEEEEED
DDRPRRKRRKDKYRDFIIDEAEVDDEVEDDDEWEEGAQEIGIVGNEVDELGPTAREIEGR
RRGTNLWDSQKEDEIEEYLRKKYADESIATRHFGDGGEEMSDEITQQTLLPGVKDPNLWM
VKCRIGEEKATVLLLMRKFITYQYSNEPLQIKSIVAPEGVKGYIYIEAYKQPHVKAAIEN
VGNLRMGIWKQQMVPIKEMTDVLRVVKEQTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQN
QVHLKLLPRIDYTRPRGALRTAQSESEALKRKRKRRPAAKPFDPEAIRAIGGEVTSDGDF
LIFEGNRYSRKGFLYKNFTTSAIIAEGVKPTLSELERFEEAPEGVELDLSGTPATGAGNK
EDATVTHSFSTGDNVEVCEGELINLQGKIVSIDGNMIMVMPKHEELREALEFQASELRKY
FTMGDHVKVVAGRYEGDTGLIVRVEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSL
GQFQWGDLVQLDAQTVGVIVRLERENFHVLSMHGKVIEARPQGLTKRRENRNAVALDSQQ
NTIQRKDIVKVVDGPHAGRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKS
NISSMSPVAGFMSPRIASPMHPSGGGFGRGGGGGRGRGRGGGARRDRELIGTTIKITGGP
YKGNVGIVKDATETTARVELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYGGGQT
PMYARDGSKTPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTN
DFDGYSMEEGGSPGYAPGYPSTGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSASASPSPT
GYVATPSPSGTGYTTSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGAGLDTNVGSGIIG
GAEWHTTDIEVRIRDSHQDPALAGQQGVIRGISGGMCSIFLPVEDRVVNLICEELEPVVP
SRGDRVKVIIGEDREAVGTLLSIDNQEGVVKLNKDEVKMLHLRFLCKMKASNT
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcagaggcgagcaatctatcagacaatgaaagcgatcgaggagttggcggc
agcgaaagtgatcaagaagagaaccattcagtgaaatccgcagctggcagcgatggtgga
aacgctggtgaaagatcacgtagcgtctctcgcagtagaagtccgtccaggtcacgatcg
aggagtccacgcaggtggcgatcacggtctcgatcagccagcggttcagaggatggtaga
ggagatgaagcagaggaagcaagatctggtgatgaagagatggtggagcctgaggaagaa
cctgaaggcgaagatttggaaggaagtagcgaatatgacgaggaagaagaagaggaggac
gatgatagacctcgtaggaaaaggagaaaagacaaatatcgtgattttatcatagacgaa
gctgaagtagatgatgaagttgaagatgatgatgaatgggaagaaggtgcccaagaaatt
ggtattgttggaaatgaagtggacgagttgggtcctactgccagagaaattgaaggcaga
cgtagaggaactaatctttgggattctcaaaaggaagatgaaatagaagaatatcttaga
aaaaagtatgcagatgaatctattgctactcggcattttggtgatggcggtgaagaaatg
agtgatgaaatcacacaacaaactttactgccaggtgtgaaagatccaaatctatggatg
gtaaagtgccgtattggagaggaaaaagcaacagtactattgttaatgcgaaaatttata
acataccaatattcaaatgaacctcttcaaataaaatctattgttgcacctgaaggagta
aagggttatatttacatagaagcgtacaaacaaccacacgtgaaggcagccatcgaaaac
gtaggaaatctaagaatgggtatttggaaacaacagatggtaccgatcaaagagatgacc
gatgtgttacgtgtagttaaagaacagacaggcttaaaagcgaaacaatgggttagacta
aaaagaggcatttataaagatgacatagctcaagttgactatgttgacttggcacagaat
caggttcatttgaaattgttgcccagaattgattatactagaccacgtggagctttgaga
acagcacaaagcgaatctgaagccttaaaacgcaagagaaaaagaagaccagcagccaaa
ccgtttgaccccgaagcaattcgtgctatcggaggagaagtcactagcgatggtgacttc
ttgattttcgaaggaaatagatatagtagaaaaggatttttgtataaaaattttaccaca
agtgcgattatcgcagaaggtgtgaaaccaacattatctgaactagaaaggttcgaggag
gctcccgagggtgtcgaattagatttaagtggaactccagcaactggtgcgggtaataaa
gaagatgcgacggtgacccattctttcagtacaggggacaatgtcgaagtatgcgaggga
gaattgattaacttgcaaggaaaaattgtctctatagatggaaacatgattatggttatg
ccaaaacatgaggagcttagagaagccttagaatttcaagcgtctgaattacgaaaatat
ttcactatgggtgaccacgttaaggttgttgcaggaagatatgagggtgataccggttta
atagtccgagtcgaacaaaatagagtagttttgttttctgatctttcaatgcatgaatta
gaagtgcttccaagagatctacaactttgttcggatatggcaactggagtagacagttta
ggtcaatttcaatggggtgatttagtacagctggacgcacaaaccgtgggtgtaattgtt
cgattggaacgtgaaaattttcacgtactctcaatgcatggcaaggttatagaagctaga
cctcagggactcacaaagagacgcgagaatagaaatgcggtggcgttagactcacaacag
aacactatacaaaggaaagacattgtcaaagtggtagatggtccacacgctggaaggggc
ggcgaaataaaacatttgtacagaagctttgcatttttgcattcgcgaatgttcgttgac
aacggtggaatcttcgtttgcaaaacgagacatttgcaactttctggtggaaataagtcc
aatatatcgtctatgtcacctgtggcaggattcatgtcgccaagaatagcttctccaatg
catcctagtggaggtggcttcggaagaggtggcggaggtggaagaggcagaggtcgtggt
ggtggagccagacgtgacagagaattgataggaaccactatcaaaataactggtgggccg
tataagggaaatgttggaatagtaaaagacgctacagaaacaactgctcgtgtagaatta
cactccacctgtcagaccatctccgtggacagatctcacattgcgaacgttgctgtactc
acaaaggatggtggtttcagcagctacaacaggacaccagcgtatggtggtggacagaca
cccatgtatgctagagatggatcgaaaacacccatgcatggctctcaaacaccaatgtac
gaaaatggttctcgtacacctcattatggctcgatgacaccatcccacgatggttcacgc
acaccgggacaatctggtgcttgggatccagctgttacaaatactcctgccagaacgaac
gacttcgatggatatagtatggaagaaggcggatctccaggttatgcgccaggttatcct
tcaactggacctttcacgccacaaacgcctggcacgatgtacggttcagagcagagcttc
agttcatatcaaccgagtcctagcccggcaggaagtgccagtgcaagtccaagtcctaca
ggatacgttgcaactccctcgccaagtggtactggatatactactagtccgcatggagcc
tttgccacaccttcacccatgggttacagtcctatgactccaggagttgcaggtagccca
tacaatccacagacaccaggcgctggtctagatacaaatgtcggttctggaatcattgga
ggagccgaatggcacacaacagatattgaggttcgaattcgtgactctcatcaagatcct
gcgttagctggacagcaaggtgttattcggggaatatccggtggcatgtgttcaatcttc
ctacctgtagaagacagagtagtgaatttgatttgcgaggagttagaaccggtagttcca
tcgcgaggtgaccgagtcaaagtgattatcggagaagacagagaagcagtaggcactctg
ctatccatagataaccaagaaggtgtagtgaaattgaacaaggacgaagtgaaaatgttg
cacttgcggtttttgtgcaagatgaaggcatcgaatacataa
DBGET
integrated database retrieval system
