KEGG   Bombus impatiens (common eastern bumble bee): 100749687
Entry
100749687         CDS       T04362                                 
Name
(RefSeq) roquin-1 isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
bim  Bombus impatiens (common eastern bumble bee)
Brite
KEGG Orthology (KO) [BR:bim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bim03000]
    100749687
   04121 Ubiquitin system [BR:bim04121]
    100749687
Transcription factors [BR:bim03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    100749687
Ubiquitin system [BR:bim04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100749687
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-CCCH zf-RING_2 zf-C3HC4 zf-C3HC4_4 zf_CCCH_4 Prok-RING_4 Vesi_VP2 PaaA_PaaC zf-C3HC4_2
Other DBs
NCBI-GeneID: 100749687
NCBI-ProteinID: XP_012244327
UniProt: A0A6P3UZM6
LinkDB
Position
Unknown
AA seq 911 aa
MPIQAPQWTEFLSCPVCCHDFDVAIRGPISLGCGHTICRTCLANLHRKQCPFDQSIINTE
IERLPVNEALLQLVGNPVPTNVATAYQKLLPPEDHANYLVAKRCIEELALYLKPCQTNPS
LATGVGLVSRPMQRKLVTLVGCQLVEPEGRARAVRAARSLGERSVTELILQHQNPQQLNA
NLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLESHFPQASKTS
IGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPD
QWSALLYGDTSHKSHMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQLSSLRPQLELLA
AIDPSPETEPPTLAECRAALEAVRTVVAALVEFIQQHGNRKTQDGTHNVGPGQPKYKVSM
CRDLALRGSCPRSTNCTFAHSDMELDKYRSKSRKLSLRSSLPGINHSDVKTDKSVTGSNN
KTFKQNDDLSYHSIKSHDNTHRESFNSMNKVNPIQHHNPTNENNFIGSLTNYMLPSPQGM
LPVVPTKNIDVHCSHYIMPNTPVDYTAPNLNIWDSSQLSSNMTNGISNTKKQRTVAKTLA
MLLQRKVEILNQLGTIVNKQVPQVKTNYDIQGDTISSNFSIWTNTPNNPMVSSTNINCNN
NFRCADPILFDDEFVPFDASSNSKYGPISKLSKNLIRSTNGVQSTNFYADGGTSPTISAY
RSMPTTNSITSWYYGNQPYATIGANGGIQAINNSNFEDSYITFGRNISDTSTHTQLPRPD
SMSKDLILESQKVKQQLKHLEKKINDLKLATQGATFTAGERLAQELQMIEAGIREKEKDV
RNWSPYGTVPWIQSSNNLLSSQNFSQDYKPEEEDTYEAGIANDMRELELRWEFELQEQEK
HWSSEEDNSKK
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgccaatacaggcaccacagtggactgaatttctttcgtgtccagtttgctgtcatgac
tttgatgtggccatacgtggtccaatatcgttaggatgtggtcataccatatgtcgtacg
tgccttgcaaatttacatcgtaaacaatgcccttttgatcaaagtattattaatacagaa
atagaaagattaccagtaaatgaagctttattacaattggtgggaaatcctgttcccaca
aatgttgcaacagcttatcaaaaattgctaccacctgaagaccatgctaattatttggtt
gcaaaacgttgtattgaggaacttgctctatatctcaaaccatgtcagacaaatccttct
ttagctacaggtgttggacttgtttctcgacctatgcaaaggaaattggtaactttagtt
ggttgccagttggttgaaccagaaggaagagcgcgtgcagtaagggcagctagaagtttg
ggtgaaagatcagttacagagttgatactacaacatcaaaatccacaacaacttaatgct
aatctatgggctgctgtaagagctcgtggatgtcaatttcttgggccagcaatgcaagaa
gaagtactaaaacttgttttattggctttggaagatggatctgccctttctaggaaagta
ttagttatgtttgtagttcaacgtctagaatcacattttcctcaagcttctaaaactagc
ataggacatgttgtacaattgttgtatagagcaagttgttttaaggtatctaaacgagaa
ggagattcatcattaatgcaattaaaagaagagtttagaacatatgaagctttgaggagg
gagcatgatgctcaaatagtgcaaattgcgactgaagctggtttaagaatagcacctgat
caatggtctgcattgttatatggagatacaagccataaatctcatatgcaaagtattata
gataaacttcaaactccacaatcttttgctcaaagtgtacaagaattggttattgctctt
caacgtactcctgatcctggacaattaagtagtctaagacctcaactagaattgttagct
gcaatagatcctagcccagaaactgaacctcctacattagcagaatgtcgagcagcatta
gaagctgttagaactgtagtcgcagcgttagtagagttcattcaacaacacggtaatcgg
aaaacgcaagatggtacccacaatgtaggtcctggacaaccaaaatataaagtgagcatg
tgtcgagatctcgcacttagaggctcttgtcctaggtctactaattgtacatttgctcat
agtgacatggaactagataaatatagatcaaaaagtcggaaattgagtctcagatcaagt
ttacctggaatcaaccattcggatgtgaaaacagacaaatcagttactggatcaaataat
aagacatttaaacaaaatgacgatttatcttatcattccataaagtcgcatgataatact
catagggaaagctttaattctatgaataaagttaatccaatacaacatcacaacccaaca
aatgaaaacaattttatcggatcattaacgaattatatgctaccatctcctcaaggaatg
ttacctgtggtaccaacgaaaaatattgacgtacattgttctcattatattatgcctaat
acacctgttgattacactgcacctaatcttaatatttgggattcgtcgcagctttcatct
aatatgaccaatggaatatctaatactaaaaagcagcgaactgttgcaaaaacattggcg
atgttactgcaacgtaaggtggaaatattaaaccaacttggaacaattgtcaacaaacaa
gtgccacaggtgaaaacgaattacgacatacaaggagacacaatatcatcgaatttctct
atatggacaaacacaccaaataatccaatggtttcttcaacaaatataaattgcaacaat
aatttccgttgtgcagatcccattctattcgatgatgaatttgtgccatttgacgcatca
tcgaatagtaaatatggaccaatttctaaactatccaaaaacttaatcagatctactaat
ggcgtacagtctactaatttctatgcagatggaggaacatctcctacaatatctgcttat
cgatctatgccaactacaaattctattacgtcttggtattatggaaatcaaccttatgca
acaattggtgcaaatggaggaatacaggctatcaataacagtaattttgaagatagttac
attacatttggtcgtaatatatccgatacgtcaacgcacacacaacttcctcgaccagat
agtatgtctaaagacttaattcttgagtcgcaaaaggtaaaacaacaattaaaacatctt
gagaagaagattaatgacttgaagcttgccacacaaggtgcaacttttacggctggggaa
aggttagcacaagaattacaaatgattgaagctggcatcagagaaaaagaaaaagacgta
cgaaattggagtccatacggtaccgtaccttggattcaatcgtcgaacaatttacttagt
tctcaaaatttcagtcaagattataagcccgaagaagaagatacctacgaagcaggtatc
gcaaatgatatgcgggaattagaattacgatgggaattcgaactacaagaacaggaaaaa
cattggtcaagtgaagaggataattctaagaaataa

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