Bombus impatiens (common eastern bumble bee): 105681196
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Entry
105681196 CDS
T04362
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105681196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bim03021
]
105681196
03019 Messenger RNA biogenesis [BR:
bim03019
]
105681196
Transcription machinery [BR:
bim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105681196
Messenger RNA biogenesis [BR:
bim03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105681196
U7-dependent histone pre-mRNA processing factors
105681196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
Motif
Other DBs
NCBI-GeneID:
105681196
NCBI-ProteinID:
XP_012244772
UniProt:
A0A6P3UZR7
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MSVKRKPETQVPAEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDAL
PFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKV
SNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVK
ILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRG
GRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKI
RRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVI
IAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPH
VVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAME
TPKPGQTLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSIYFSASLPVLKHLLTQI
AGNLEVVDDKKLRVFKNIDVTIDGKIVTMEWIATPVNDMYADSVLTAILQAEMMEQPPKV
LPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKE
DETFQQIVQTAVTKLHQSLAPPCDTI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaaaagaaagccagaaacacaagtgccagccgaagaaagtgatttattatcg
attagaccgcttggagctggccaagaagtcggaagatcgtgtatcatgttggaatttaaa
ggcaaaaagattatgttagattgtggtatacatcctggcttatctggtatggatgcatta
ccatttgtggacttggtagaagcagatgagattgatttactgctaatttctcattttcat
ttggaccattgtggagccttaccatggtttttacaaaaaaccagttttaaaggacgatgt
tttatgacacacgccactaaagccatatatcgttggctcttgtctgactatatcaaagtt
agtaacattgcgacagagcaaatgttatacaccgaatctgacctagaaactagtatggac
aaaatagaaactatcaatttccatgaagaaaaagatgtgtttggaatcaaattttgggcc
tataatgccggccatgtattaggtgctgctatgtttatgattgaaatagcaggtgttaaa
attttatatactggggattttagtcggcaagaagatagacatttgatggcagctgaaatt
ccaaatattcatccagatgttttaattactgaatctacttatggtacacatatacatgaa
aaaagggaagatcgtgaaggaagatttacaaatttagttcatgaaattgttaatagaggg
ggaagatgtttaataccagtgtttgcattaggtagagcacaggaacttctccttattttg
gatgaatattggagtcaacatcctgaacttcatgaaattcccatttattatgcttcttct
ttagcaaagaagtgtatggctgtttatcaaacttatgtaaatgcaatgaacgacaaaatt
agacggcaaatagctattaacaatccttttgtatttaaacatatctccaatttaaaagga
attgatcattttgaagatattggaccgtgtgtagtaatggcttctcctggtatgatgcaa
agtgggctatcaagggaattatttgaatcttggtgtacagatgcaaaaaatggagttata
attgctggttactgtgtagagggaacattggcaaaaactattttatcagaacctgaagag
attacaaccatgtctggacaaaagttaccattaaaaatgtctgttgactatatatcattt
tcagcacatacagattatcaacaaacttcagaattcatacgtattttaaaaccaccacat
gttgtacttgtgcatggggaacaaaatgaaatgggtagattaaaagcagcattgcaaaga
gaatatgaagatgatcctaatacaacaatggaaatacataatccaagaaatactgttgct
gtagaattatactttaggggggaaaaaactgccaaagtaatgggcacattagcaatggaa
acaccaaaaccaggacaaacattatctggggttttagtgaaaagaaatttcaattatcat
atgctagcaccttgcgacttatcaaaatatacggatatgagtatgagtcaagttattcaa
agacagagcatttatttttcagcatcattaccagtattaaaacatcttctaactcaaatt
gctggaaacttggaagttgtagatgataaaaaattacgtgtttttaaaaatattgatgtc
acaattgatggaaaaattgttactatggagtggatcgcaacacctgtaaatgatatgtac
gcagattctgttttgactgcaatattacaagctgagatgatggaacagccacccaaagta
ttaccagcacctacaaaaatggatcgaatgcattttaaagaatgtttgatagaaatgtta
caagaaatgtttggggaggactctgttcctaagatctttaaaggagaaaagctgtatgta
acagttgatgggaaaaaagcacatatagatttattaaatttagaagtcaccagtaaagaa
gatgaaacatttcaacaaatagtacaaacagcagtaacaaagttacaccagtctcttgca
cctccctgtgatacaatttaa
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