Bombus impatiens (common eastern bumble bee): 112213208
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Entry
112213208 CDS
T04362
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
bim
Bombus impatiens (common eastern bumble bee)
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bim03021
]
112213208
Transcription machinery [BR:
bim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
112213208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_19
TPR_CcmH_CycH
TPR_14
TPR_17
TPR_10
TPR_11
TPR_16
TPR_9
TPR_Slam
ARM_TT21_5th
ARM_TT21_4th
ANAPC3
Motif
Other DBs
NCBI-GeneID:
112213208
NCBI-ProteinID:
XP_024224883
LinkDB
All DBs
Position
Unknown
AA seq
1794 aa
AA seq
DB search
MANFIIRVIELDLDQLPEIDGILDNLRQGRLRLNIWVNLALEYYKQHKIEHFIKILESSW
IDAAIDYCNYEQDQMRALDMLAAYYVQEANREKDKARKKDLFAKATLLYTTADKIIMYDE
NHLLGRAYLCLLEEDRMAQADAQFNFVLSRSPNNIPSLLGKACIAFNKRDYRDALAFYKK
ALRTNPNCPAAVRLGMAHCFMKLNNQEKAYLAFERALQLDDRCVGALVGLSVLKLNQGQS
DSIKAGVQMLSRAYIIDSTNSMVLNHLANHFFYKKNYIKVQNLALYAFQNTANEVMRAES
CYQLARVFHVQADYDQAFRYYYQAIQFAPPVFVLPYFGLGQMHVYRGDAENAAKCFEKVL
EVQPNNYETMKILGSLYANSSSQSKRNIAKNHLQKVTQQFPDDIEAWIELAQILEQSDHN
AALNAYGMVTRILKENVQADIPPEILNNVGALHYRLGNFEEARKNFEESLTRSKADVLHD
PVYYNSITVTTTYNLARLNEALCIFDKAENLYKSILWKHPNYIDCYLRLGCMARDKGQIY
EAIDWFKDALSINNEHPGAWSLLGNLHFDKMQWGPSQKKFERILTNPETSTDAYSLIALG
NIWLQMLYQSRKDKDQKKRYQDRALAIYKKVLQNDPKNIWAANGIGAVLAHKGCVNEAKD
IFSQVREATAEFCDVWLNIAHIYVEQKQFFNAIQLYINCLRKFYKYHHVKVLQYLGRAYF
KAGKLKEAKLTFLKGRRVAPQDTVLLYNVALVLQCLATQILKDEKSTLTTVLQAVYELRI
SHKYFQYLSTHEGKIWQLAKAKAKCCQDLLSQAQYHVARARQWDEEEKMFRRKQEEERQA
FKMRQMEELRRLEEMQRQKEQEMLQKRLEYVEKTKNALVFDAMSSEKPGRKGKQARIDQY
VSDSGSSGREESREEARRQRKRKRKASERKENRVKGKVMRKKKMGSRESGSESDRLKPKR
GRKGIIKKDRAFWRSTAETAKRKMPLSKEIISTSESDSDLGGFKIANRGKSRNGGHVRRN
RRIMYHLEESRTSKSRSRSRSKFRSRSRSSSRLGSRSRSRSGIQSRSVFRPRSRSRSGSK
LRSQSCSKSPSRSRFVAEKSGPRPTSRSGSWKRQSRSRSRSGLRESESQPRSRPGFVASA
RSRLGSVASAQSKSGFARSTRSRPGSTASTQSRSGSASSARSRSGSPASARSKSGSPRSA
RSRSGSAASARSRSGSPARARSKSGSARNARMRSGSVASARSRSGSAANVHSRSESAASA
QSRSGSAGSARSRSGSPASARSKSGSARSARSSSGSAASARSRSDSAASARSRSESAGSA
RSSSGSAASARSRSSSASSPSSRSGSAASARSRSGSPRSARSRSGSAASARSRSGSPANV
PSKSSSPRSARSRSGSAASARSRSGSPRSARSRSGSAASARSRSGSASSPSSRSGSAASA
RSRSGSPRSARLRSESAASARSRSGSPANVPSKSSSPRSARSRSGSAASARTRSGSADSA
RSISGSVASALSRSGSARSVRLRSGSVASALLRSGSARNVRLRSGSLASASSRSGSARSV
RLRSGSTASALLRSGSVRSVRLRSGFVASARSISGFTDSARSRWGLTASALLRPGSARSV
RLRSGSVASAPSRSGSARSIRLRWVSAASARSISGFADSATSRWGLTASALLRRSSARSI
RLRSGSTASARLRWSSASSARSRLGSAASARSRSGFAAGDQGVVHSRGDVYQEAEADQNV
NLCQDLDRVPAHGQRVALEVAALLDQQESRKSVLSSDVGSRQSSTDRGGGNESE
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactttattattcgagtaatcgagttagacctggatcaattaccagaaatagat
gggattcttgataatttacgtcaaggacgtctacgacttaatatttgggtcaatttggct
cttgaatattacaaacaacataaaatcgaacatttcattaaaatacttgaatcttcttgg
attgatgctgctattgattattgtaactatgaacaagatcaaatgcgtgcgttggatatg
ttggctgcatattatgtgcaggaagccaacagagaaaaggataaagccagaaagaaagat
ctatttgcaaaagccactctattatatacaactgcagataagattattatgtatgacgag
aatcatttacttggcagagcttatctctgcctcctggaagaggataggatggctcaggct
gatgcccaatttaattttgtactaagtcggtctccaaataatattccttccctactggga
aaagcatgcatagcgtttaacaaaagagattacagagatgcgcttgctttttataaaaag
gcattgagaacaaatccaaattgtccagctgctgtgaggttggggatggcgcattgtttt
atgaaattaaataaccaggaaaaagcgtatttagcatttgaaagagctttacagttagat
gaccgatgtgttggagcattagttggactttcagtactgaaactgaatcaaggacagtct
gatagtatcaaagctggtgttcaaatgttatcaagagcttatatcattgactcaactaat
tccatggtgttgaatcatttggcaaatcattttttctataaaaagaactatattaaagta
cagaacttagccctctatgcatttcagaatactgcgaacgaggttatgcgtgcagaaagt
tgctatcaattagccagagtatttcatgttcaagctgactatgaccaagcgtttcgatat
tactatcaggcaatacaatttgcgcctccagtttttgtattaccatacttcggtttaggt
caaatgcatgtttatcgtggtgatgcagaaaatgcagcgaaatgtttcgaaaaggtgttg
gaagtgcagccaaataattatgaaacaatgaaaattcttggatctctttacgcaaattca
agttctcaatccaaacgcaacattgctaaaaaccaccttcagaaagtaactcaacaattt
ccggatgatattgaagcatggattgaattggctcaaatattggagcaaagtgaccataat
gccgccttaaatgcatatggtatggtaactcggattttaaaagaaaatgtccaggcagat
ataccaccagaaattctaaataatgttggtgctctacattatagacttggaaactttgaa
gaagctaggaaaaattttgaggaatctttaacgcgttccaaagctgatgtcttacacgat
cctgtatactataactcaattacagttacgacgacatataatttggctcgtttgaacgaa
gctttatgtatatttgataaagcagaaaacttatacaaatccattttatggaaacatcca
aactatatagattgttatttacgacttggctgtatggctcgagataaaggacaaatttat
gaagcgattgattggtttaaggatgctttaagcataaataacgagcacccaggtgcatgg
tctcttttgggtaacttacatttcgataaaatgcaatggggccctagccagaagaaattc
gaaagaattttaacaaatccagaaacaagtaccgatgcctattctttgattgctttgggt
aacatttggttgcaaatgttgtatcaaagtagaaaagataaagatcaaaagaagcgatat
caagacagagcattggctatatataaaaaggttttgcaaaacgatcctaaaaatatttgg
gctgcaaatggaataggagctgtactagcgcataaaggttgtgtaaatgaagctaaagat
attttttctcaagttcgagaagcaacagcagaattttgcgatgtatggttgaatattgcg
cacatttatgtagagcaaaaacaattctttaacgctatccaactgtatataaactgcctt
cggaagttctataaataccatcatgtcaaagttttgcaatatcttggaagagcttacttt
aaagctggtaaattaaaagaagcaaaattgacatttttaaagggaagaagagtagctcca
caggacactgttttgttatacaatgttgcacttgtccttcaatgtctagcgacacaaatt
ttgaaggatgagaagtccacattaacaacagtgctccaggcagtttacgaattgcgaatc
tcacataaatacttccaatatctatcaacgcatgaaggtaaaatttggcaacttgcgaaa
gcaaaagcaaagtgctgtcaagatcttttatcgcaagcgcaatatcatgttgccagagct
agacaatgggacgaggaagaaaaaatgtttaggagaaaacaagaagaagaaagacaagca
tttaaaatgcgacaaatggaagaactacggagacttgaagaaatgcaacgacaaaaagaa
caggaaatgttacagaaacgtttagagtacgttgaaaagacaaagaacgctttggtattc
gatgcaatgtcttcggaaaaacctggaaggaaaggaaaacaagcacgcattgatcaatac
gttagtgacagtggtagttctggaagagaggaaagtcgggaggaagctcgtagacaaagg
aaacgcaaaagaaaagcaagtgaacgtaaagaaaacagggtcaagggtaaagtaatgcgc
aagaaaaagatggggagtagagaaagtggttcagaaagtgatcgactcaagccgaaacgt
ggaagaaaagggattattaagaaagacagagcattttggagaagtacagctgagactgca
aagagaaagatgcctttatcgaaggaaattatatcaacgagcgaatctgatagcgattta
ggaggttttaaaattgccaaccgaggtaaaagccgtaacggaggtcacgtacgcagaaac
agacgaattatgtatcacttagaagaatcccgtacatcgaaatctaggtctcgttccaga
tcgaaatttagaagccgttctagaagtagttcacgattgggatcacgatcacgatcacga
tcaggaattcaatctcgatccgtatttcgtccacggtctagatctcgttcaggttccaag
ctgagaagtcaatcgtgttcgaaaagtccgtcgagatccagattcgttgcagagaaaagt
ggtccacgcccgacatcaagatcagggtcgtggaagaggcaatcgcgatcaagatcgcgt
agtggtttgagggaaagtgaatcgcagccaagatcaaggccgggttttgtagctagtgca
cgatcaagattgggttctgtagctagtgcacaatcgaaatcaggctttgcacgtagtaca
cgttcgagaccgggatctacagctagtacacaatcaagatcgggttctgcaagtagcgcg
cgatcaagatcgggttctccagctagtgcacgatcgaaatcaggctctccacgtagtgca
cgttcgagatcgggatctgcagctagtgcacgatcaagatcgggctctccagctcgtgca
cgatcgaaatcaggctctgcacgtaatgcacgtatgagatcgggatctgtagctagcgca
cgttccagatcgggatctgcagctaacgtacattcgagatcggaatctgcagctagtgca
caatcaagatcgggttctgcaggtagcgcacgatcaagatcgggctctccagctagtgca
cgatcgaaatcaggctctgcacgtagtgcacgttcgagctcgggatctgcagctagtgca
cgatcaagatcggattctgcagctagtgcacgttcgagatcagaatctgcaggtagcgca
cgttcgagttcgggatctgcagctagtgcacgttcgagatcgagttctgcatctagccca
tcatcaagatcgggttctgcagctagtgcacgatcgagatcaggctctccacgtagtgca
cgttcgagatcgggatctgcagctagtgcacgatcaagatcgggttctccagctaatgta
ccatcaaaatcaagctctccacgtagtgcacgttcgagatcgggatctgcagctagtgca
cgatcaagatcgggctctccacgtagtgcacgttcgagatcgggatctgcagctagtgca
cgttcgagatcgggttctgcatctagcccatcatcaagatcgggttctgcagctagtgca
cgatcgagatcaggctctccacgtagtgcacgtttgaggtcggaatctgcagctagtgca
cgatcaagatcgggttctccagctaatgtaccatcaaaatcaagctctccacgtagtgca
cgttcgagatcgggatctgcagctagcgcacgtacgagatcgggatctgcagatagcgca
agatcaatatcgggttctgtagctagcgcactatcgagatcaggctccgcacgtagtgta
cgtttgagatcgggttctgtagctagcgcactattgagatcaggttccgcacgtaatgta
cgtttgagatcgggatctctagctagcgcatcatcgagatcaggctccgcacgtagtgta
cgtttgagatcgggttctacagctagcgcactattgagatcaggttccgtacgtagtgta
cgtttaagatcgggttttgtagctagtgcgcgatcaatatcgggttttacagatagcgca
agatcaagatggggtcttacagctagcgcactattgagaccaggctccgcacgcagtgta
cggttgagatcgggttctgtagctagcgcaccatcgagatcaggctccgcacgtagtata
cgtttgagatgggtttctgcagctagtgcacgatcaatatcgggttttgcagatagcgca
acatcaagatggggtcttacagctagcgcactattgagacgaagctccgcacgtagtata
cgtttgagatcgggttctacagctagcgcacgtttgagatggagttctgcatctagcgca
cgatcaagattgggttctgcagctagtgcacgatcaagatcgggttttgcagctggagat
caaggagtggttcacagtcggggagacgtatatcaagaagcagaagccgatcaaaatgta
aatctgtgtcaagatctagatcgcgttccggctcacggtcaaagagtggctcttgaagtc
gcagcgctactggatcagcaagagtcgagaaaatcagttttgagcagtgatgttggttcc
cgccaatcgagtacagatcgaggaggtggcaacgaaagcgaataa
DBGET
integrated database retrieval system
