Brucella inopinata: BR141012304_10437
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Entry
BR141012304_10437 CDS
T07095
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bio
Brucella inopinata
Pathway
bio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BR141012304_10437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bio03019
]
BR141012304_10437
03009 Ribosome biogenesis [BR:
bio03009
]
BR141012304_10437
Enzymes [BR:
bio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BR141012304_10437
Messenger RNA biogenesis [BR:
bio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BR141012304_10437
Ribosome biogenesis [BR:
bio03009
]
Prokaryotic type
rRNA helicases
BR141012304_10437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
SCD22878
LinkDB
All DBs
Position
1:complement(444474..446354)
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AA seq
626 aa
AA seq
DB search
MSLPDTIAPALSGALTARGYNTLTAVQNAVLAPETLASDLLVSAQTGSGKTVAFGLAMAN
TILEDELRFGDAGAPLAMIIAPTRELALQVRRELEWLYADTGARIASCVGGMDIRTERRA
LERGSHIVVGTPGRLRDHITRNALDMSQLRAIVLDEADEMLDMGFREDLEFILGEAPEDR
RTLMFSATVPKPIAQLAKRFQNNALRITVQSETSQHADIDYVAMPVPPHERDHAIINTLL
YYDSQNSIIFCSTREAVKHMASRLSNRGFAVVALSGELSQAERNNALQAMRDGRARVCVA
TDVAARGIDLPNLDLVIHADLPTNPDTLLHRSGRTGRAGRKGTCVLVVPFSRRRSAERLL
HMAKLDAQTVPAPSIAAVQAKTNERILNAEVFNQPVEEEYQELLKALAERYTPEQIASAF
LNREVASYPAAEEVSDAPVHPVGGKKPRSDRFEKGDRYERGERRERGEPGERFDRNARFD
GVWFSVSAGRKHRADPKWLLPLICKAGDVSKRDVGSIKIFDNETRFEIAASKADEFRQSV
AERGTGEKSLVIRTAVAGAGGDAAARESRGSFKPRSDKFKEGGFRDGHKSDKPRDFSRGD
DFKKDGFKKGGKKPEGGGYSKKRRGE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcctgataccatcgctccggctctctccggagcattaaccgctcgcggttac
aatacgcttaccgctgttcagaatgctgttctggcccccgaaacactcgcttccgatctt
cttgtgtctgcccagacggggtctggcaagacggtggcttttggccttgccatggccaac
accattctcgaagacgaactgcgcttcggtgatgcgggtgcgccacttgccatgattatc
gcgccgacgcgcgagctcgcacttcaggtgcgccgtgaactggaatggctttatgccgat
accggcgcgcggattgcatcctgcgttggtggcatggatatccgtaccgagcgccgcgcg
ctggagcggggaagccatatcgtcgtcggcacgccgggccgcctgcgcgaccacattacg
cgcaatgcgctcgatatgtcgcaactgcgcgcgatcgtgctcgacgaagccgatgaaatg
ctcgacatgggctttcgcgaagacctcgaatttatccttggcgaagcgccggaagaccgc
cgcacgctgatgttctcggcaaccgtgccgaagccgattgcccagcttgccaagcgtttc
cagaacaatgcattgcgcatcaccgttcagagcgaaaccagccagcatgccgatatcgat
tatgtcgccatgccggtgccgccgcatgagcgtgaccatgcgatcatcaacacgctgctt
tattacgatagccagaactcgatcattttctgctccacccgcgaagcggtaaagcacatg
gcaagccgcctttccaatcgcggtttcgcggtggtggcgctttcaggtgagttgagccag
gcggagcgcaataacgcgcttcaggccatgcgggacgggcgcgcccgcgtctgtgtggcg
accgacgttgccgcgcgcggcatcgacctgcccaatcttgatctggtcatccatgctgat
ctgccaaccaatccggatacgcttctgcaccgttctggccgtacgggccgcgcgggccgc
aagggcacctgcgtcctggttgtgccgttctcgcgccggcgcagtgccgaacgcctgttg
cacatggcaaagcttgatgcgcagacggttcccgcgcccagcattgctgccgttcaggcc
aagaccaatgagcgcattttgaatgcggaagtcttcaaccagcccgttgaagaagaatat
caggaactgctgaaggcccttgccgagcgttacacgccagagcagattgcgagcgccttc
ctcaatcgcgaagtggcctcctatccggcggcggaagaagtatccgatgcgccggtgcat
ccggttggcggcaagaagccgcgttcggaccgttttgaaaagggggatcgttatgagcgc
ggcgaacgccgtgagcgtggcgaaccgggcgaacgcttcgaccgcaatgcgcgttttgat
ggcgtctggttctcggtttcggctggccgcaagcaccgcgccgatccgaaatggctgctg
ccgctcatctgcaaggcgggtgacgtatccaagcgcgatgtcggctcgatcaagattttc
gacaatgaaacgcgctttgaaattgcggcatccaaggcggatgaattccgccagtcggtg
gctgaacgcggcacgggcgaaaagagtctcgtaatccgcaccgccgttgctggcgctggc
ggcgatgctgctgcgcgtgagagccgcggcagcttcaagccacgtagcgataagttcaag
gaaggcggcttccgggacggtcacaagagcgataagccgcgcgatttttcccgcggtgat
gacttcaagaaagatggcttcaaaaagggcggtaaaaaacccgaaggtggcggttacagc
aagaagcgtcgcggtgaataa
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