KEGG   Brucella inopinata: BR141012304_10673
Entry
BR141012304_10673 CDS       T07095                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bio  Brucella inopinata
Pathway
bio03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bio00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BR141012304_10673 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bio03021]
    BR141012304_10673 (rho)
   03019 Messenger RNA biogenesis [BR:bio03019]
    BR141012304_10673 (rho)
Transcription machinery [BR:bio03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BR141012304_10673 (rho)
Messenger RNA biogenesis [BR:bio03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BR141012304_10673 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_22 AAA_25 S1CSD-TOTE-2 AAA DUF6360 Fungal_virus_P2_C
Other DBs
NCBI-ProteinID: SCD23113
LinkDB
Position
1:702209..703474
AA seq 421 aa
MQEMKLQELKNKTPVELLAFAETLEVENASAMRKQELMFAILKKLAAQDVEIIGEGVVEV
LQDGFGFLRSADANYLPGPDDIYISPSQLRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFEDPEKIRHKVHFDNLTPLYPNERFKMELEVPTSKDLSPRVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAA
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRADLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKSNAEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaggaaatgaaactacaagaactgaaaaacaagacaccggtggagcttctggccttt
gccgagacgcttgaggtcgaaaatgcgagcgccatgcgcaagcaggaactgatgttcgcg
atcctcaagaagctggcagcccaggacgtcgaaatcatcggtgagggcgttgtcgaggtg
ctacaggacggttttggcttcctgcgctcagccgatgccaattatctgcccggtccggac
gatatctatatttcgccatcgcaactgcgccgtttttcgctcaagaccggcgatacggtt
gaaggcccgatccgcgggcccaaggaaggcgagcgctatttcgcgctgctcaaggtcaat
acgatcaattttgaagatccggaaaagatccgccacaaggttcacttcgacaatctgacg
ccgctctatccaaacgagcgtttcaagatggagctggaagttccgacctcgaaagatctt
tcgccgcgtgtcatcgatctggttgcgccgctcggcaaaggccagcgcggcctgatcgtc
gcgccgccgcgtaccggtaagactgttcttctccagaacatcgcccattcgatcactgca
aatcacccggaatgctatcttatcgttctcctgatcgatgagcgtccggaagaagtgacc
gacatgcaacgttcggtgaagggtgaggttatttcctcgaccttcgatgaaccggcagcc
cgccatgttcaggttgctgaaatggtcattgaaaaggcaaaacgccttgtcgaacatggc
cgtgacgtcgttatcctgctcgactcgatcacccgccttggccgcgcctacaatacggtc
gtgccgtcttccggcaaggtgctgaccggtggcgtagacgccaatgcgctgcagcgcccg
aagcgcttcttcggtgctgcgcgtaacattgaggaaggcggctcgcttaccatcattgca
actgccctgatcgataccggcagccgcatggacgaagtgatctttgaagaattcaagggc
acgggtaactcggaaatcgttctcgaccgcaaggttgccgacaagcgcatcttcccggct
atggatattctcaagtccggtacgcgcaaggaagatctgctggttccgcgcgccgatctc
cagaagattttcgtgctgcgccgcattcttgcacccatgggcacgaccgatgcgatcgaa
ttcctcatcgacaaactcaagcagacgaagagcaatgccgaattcttcgattcgatgaat
acgtaa

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