Brucella inopinata: BR141012304_11657
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Entry
BR141012304_11657 CDS
T07095
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bio
Brucella inopinata
Pathway
bio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BR141012304_11657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bio03019
]
BR141012304_11657
Enzymes [BR:
bio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BR141012304_11657
Messenger RNA biogenesis [BR:
bio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BR141012304_11657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
SCD24063
LinkDB
All DBs
Position
1:1717330..1718937
Genome browser
AA seq
535 aa
AA seq
DB search
MGRLIFIGFPGLGLVASHLPHRNGPAEEGTRNQFGHDSASRQRVFRRPVVIIKWNYVRQV
ALARRFKADRECAVPLKEIELTKENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPS
QLEGHDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTI
RNVSKSAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLVL
DEADRMLDMGFINDVKRIAKATHAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQGT
TASEITQVVHPVPTKEKRRLLSAMLTDADMRSVIVFTRTKHGADAVVRHLERDRYDVAAI
HGNKSQNARQRALNGFRDGALRILVATDIAARGIDVPGISHVVNYDLPDEPETYVHRIGR
TGRNGASGASITLYDPATEESKLRAVERVTRSKLSIKDAPVKLAPAPVAKGPAPQGQRTE
QAESRKAPAHKHRRPAQKAGEQHRAGAHASAGEAAPKPKRPFRRKRRSNGGQRAA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggccgactgattttcatcggctttcccggacttggacttgttgcgtcacatcttcca
caccggaatggtccggcagaggaagggacccgaaatcagttcgggcacgacagcgcaagt
cgccagagagttttccggcgtcccgtcgttatcattaaatggaattatgttcggcaagtt
gcgcttgcccggcgttttaaagcggaccgcgaatgcgcggtgccgctgaaagagattgaa
ttgacaaaagaaaacacgggcggcttcgccgctctcggtatcaccggcgttctgctcaaa
ggcgtggaagctgccggcatgaccgagccgaaaccgatccagacgcaggccatcccgtcg
caactcgaaggccatgatatcctcggcatcgcccagacgggttccggcaagacggcggct
ttcagcctgcccatccttcagaaaatcatcggccttggtgacaagcgccgcccgaaaacc
gcacgcgcgctgatcctggcgccgacgcgggaactggcagtacagattgagcagacgatc
cgcaatgtctccaaaagcgcgcatatctcgaccgcgctggttcttggcggcgtgtccaag
ctttcgcagatcaagcgtatcgcacccggcatcgatgtgctcatcgcaacacccggccgc
ctgacggacctgatgcgcgatggcctcgtggacctgtcgcagacccgctggctggttctc
gatgaagccgaccgcatgttggacatgggcttcatcaatgatgtgaaacgcattgccaag
gcaacacacgccgaacgccagaccgcactgttctcggccaccatgccaaaggagatcgca
tcgctggccgaacgtctgctgcgcgatccggtgcgggtggaagttgcgccacaaggcacc
acggcttctgaaatcacgcaggtcgtgcatccggtgccgacgaaggagaagcgccgcctg
ctttcagccatgctgaccgatgccgacatgcgttctgtcatcgtcttcacgcgcaccaag
cacggagcagatgccgtcgtgcgccatcttgagcgcgaccgctatgatgttgcggccatc
cacggcaacaagtcgcagaatgcacgccagcgcgctctgaacggtttccgcgatggggcc
ctgcgcattctggttgcaacggatatcgcagcacgcggcatcgacgtgcccggcatcagc
catgtggtgaattacgacctgccggacgagccggaaacctatgtgcaccgcattggccgc
accggccgcaacggcgcaagcggcgcttccatcacgctttatgatccggctacggaagaa
tccaagctgcgggcggttgagcgcgtcacgcggagcaaactttcgatcaaggatgcgcca
gtgaagcttgcaccagcacctgtcgccaaaggccccgcaccccagggccagcggactgaa
caggctgagagccgcaaggcgcccgcgcacaagcatcgccgccccgcacagaaggcgggc
gagcagcatcgcgccggggcgcatgccagcgccggtgaggccgcgccgaagccgaagcgt
cccttccgccgcaagcgccgcagcaatggcggccagcgcgcagcctga
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