Brucella inopinata: BR141012304_11831
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Entry
BR141012304_11831 CDS
T07095
Name
(GenBank) error-prone DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bio
Brucella inopinata
Pathway
bio03030
DNA replication
bio03430
Mismatch repair
bio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BR141012304_11831
03430 Mismatch repair
BR141012304_11831
03440 Homologous recombination
BR141012304_11831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bio03032
]
BR141012304_11831
03400 DNA repair and recombination proteins [BR:
bio03400
]
BR141012304_11831
Enzymes [BR:
bio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BR141012304_11831
DNA replication proteins [BR:
bio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BR141012304_11831
DNA repair and recombination proteins [BR:
bio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BR141012304_11831
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
McdB_C
Motif
Other DBs
NCBI-ProteinID:
SCD24235
LinkDB
All DBs
Position
1:complement(1904566..1908057)
Genome browser
AA seq
1163 aa
AA seq
DB search
MNDTVAGNAASGSSATPGFVHLRVHSAYSLLEGALPLGKIIKQALADEAPAIAVTDTNNL
FGALEFAQKASKDGVQPIIGCQLDIAFGDHNDNSRSVNRKLALDLAPLVLIAATEAGYAN
IVRLVSRAFLDTPAGDPIHIEAGWLPALSEDVIALTGGPLGPIGRSFTADRADRARARLA
FLKETFGNRLYVELQRQAGYDRAVEASTVELAYEMDLPLVATNEAFFLKAEDFEAHDALL
AIAEGQILSNDDRRRLTPDHCLKSRAEMAELFADLPEALENTVEIAGRCSWYTQTRKPIL
PRFTGESDDPEAAVQAEADELARQAREGLKKRLETAGLAEGYTPEQYAERLEYEIGIITR
MKFPGYFLIVADFIKWAKAHGIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNP
DRVSMPDFDIDFCQDRREEVIRYVQEKYGRDQVAQIITFGTLQARAVLRDVGRVLEMPYG
QVDRLCKLVPQNPANPVSLAQAIESEPKINEEREKEPVVGRLLDMALKLEGLYRHASTHA
AGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLQTAVKLV
ARKGIDIDLSHLPLDDALTYEMLSRGETVGVFQVESAGMRKALLGMKPDRVEDIIALVAL
YRPGPMENIPTYNARKNGEEEIASIHPKIDHLIKETQGVIVYQEQVMQIAQVLSGYSLGE
ADLLRRAMGKKIREEMDKQRVRFVDGAVERGVDKAQANMIFDLLAKFADYGFNKSHAAAY
AIVSYQTAYMKAHYPVEFLAASMTYDMSNTDKLNDFRREANRLGIEVVPPSVKTSFRPFE
VGEKKIFYSLAAIKGVGEAAVDHIVDVRAEKQFESLEDFCERIDPKIINRRVLESLINAG
AMDCFGRDRAAMCAGMDRILGFAQRTQENAVSGQSDIFGLSGAPKETLILPPTAPWLPSE
MLHREFQAVGFYLSAHPLDEYRDVLNRMRVQSWADFSAAVKRGASAGRLAGTVTARQERK
TRTGNKMGIVQLSDASGQFEAVLFSEGLAQYRDLLESGKSVVITVQAENRPEGIGLRIQT
VQSLEDEACRMQKAMRLYLRSADAVRHIAPHFNTRGDGQVSLIVIKDNGQREVEIELPHR
YRVSPQIASAMKAIQGVVEVELV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatacggtagcaggaaacgcagcgagcggtagctctgctacgccgggtttcgtt
catctgcgggttcattccgcctattccttgctggaaggcgcattgccgcttggcaagatc
atcaaacaggcgcttgccgacgaagcgccggccatcgcggtcacggacaccaacaatctg
ttcggtgcgctggaatttgcgcagaaggcgtcgaaggatggtgtgcagccgattatcggc
tgtcagcttgatattgccttcggcgatcataatgacaatagccgcagtgttaaccgcaag
cttgcgctggatcttgcgccgcttgtcctgattgcggcaacggaagcaggctatgccaat
attgtgcggcttgtaagccgcgcatttctggatacgcctgctggcgaccctatccacata
gaagctggctggctgccggctttgtctgaggatgtaatcgcgctaaccggcggacctttg
gggccgatcgggcggtccttcacggcggatcgtgccgaccgcgcgcgcgcgcgcttggct
ttcctgaaggaaaccttcggcaatcgtctctatgtcgaattgcagcgccaggcggggtat
gaccgcgctgtggaagccagtacggtggaactggcttacgagatggatttgccactggtc
gcgaccaacgaggcttttttcctgaaagcggaggatttcgaggcgcatgatgcgctgctc
gccattgcggaaggccagattctctccaacgatgatcgccgccgcctgacgccggatcat
tgtctgaaaagccgcgcggaaatggcggaactttttgccgacctgccggaagcgcttgag
aatacggtcgaaattgccgggcgttgtagctggtacacgcagacgcgcaagccgatcctg
ccacggtttaccggcgagtccgacgatccggaagccgccgttcaggcggaagccgacgaa
cttgcgcggcaggcgcgcgagggcctgaagaagcgtcttgagactgcgggccttgcggaa
ggctatacgccggaacaatatgccgaacgcctcgaatatgagatcggcatcatcacccgc
atgaagtttccgggctacttcctgatcgttgccgactttatcaaatgggccaaagcccac
ggcattccggtcgggccgggccgcggttccggtgccggttcgctcgtcgcctatgcgctg
accatcaccgatgtcgatccgttgcgcttctcgttactttttgaacgctttctcaatccc
gatcgcgtctcgatgcccgacttcgatatcgatttctgtcaggatcgccgcgaagaggtg
atccgctatgtgcaggaaaaatacgggcgcgatcaggttgcgcagatcatcacatttgga
accttgcaggcccgcgccgtgctgcgtgacgttggccgtgttctggaaatgccatacggg
caggtggatcgcctctgcaagctggtgccgcagaacccggccaatccggtatcgttggcg
caggccatcgaatctgagcctaagatcaacgaggagcgcgagaaggagccggtcgtcggc
cgccttctcgacatggcgctgaagcttgaagggctttaccgtcatgcatcgacccatgcc
gctggcatcgtgatcggtgatcgacctttgtctgagctggtgccaatgtatcgcgatccg
cgatccgacatgcctgtcacccagttcaatatgaagtgggtggagcaggcgggcctcgtc
aagttcgacttcctcggcctcaagacgctgaccgttcttcaaacggcggtcaagctggtg
gcgcgcaaggggatcgatatcgatctttcccacctgccgcttgatgatgcgctgacctat
gaaatgctgtcgcgcggtgaaaccgttggtgtgttccaggttgaaagtgcgggtatgcgc
aaggcgctgctcggcatgaaaccggatcgtgtcgaggatattattgcgcttgtggcgctt
tatcgtccgggcccgatggagaacattccaacctataatgcgcgcaagaatggtgaggag
gagatcgcctccattcacccgaagatcgatcacctgatcaaggaaacgcagggcgttatc
gtctatcaggaacaggtgatgcagatcgcgcaggtgctttcgggctattcgctcggcgaa
gctgaccttctgcgccgcgccatgggcaagaagatacgcgaggaaatggacaagcagcgt
gtccgtttcgtggacggtgcggttgagcgtggggtggacaaggcgcaggcgaacatgatt
ttcgatctgcttgccaagttcgctgactatggcttcaacaagtcgcacgcggcggcctat
gccatcgtttcttaccagacggcttatatgaaggcgcattacccggtcgagttcctcgcc
gcgtcgatgacctacgatatgtcgaacaccgacaagctcaacgatttccgccgcgaggcg
aaccgcttgggcattgaggttgtgccgccttcggtgaagacatcgttccgcccgtttgaa
gtgggcgagaagaagattttctattcgctcgcagccatcaagggtgtgggggaggcggct
gtcgatcatattgtcgatgtgcgtgccgagaaacagtttgaaagccttgaggatttttgc
gagcggattgatcccaaaattatcaatcgccgtgttctggaaagcctcatcaatgcaggc
gcgatggattgttttgggcgggaccgcgctgccatgtgcgccgggatggaccgcattctg
ggttttgcccagcgcacgcaggaaaatgccgtcagcggccagtcggatatttttggcctt
tccggcgcgcccaaggaaacactcatcctgccgccgacagccccctggctgccatctgaa
atgttgcatcgtgagtttcaggcggtcggcttttatctgtctgcccatccgctggacgaa
tatcgcgacgtcttgaaccggatgcgtgtgcaaagctgggctgatttttcagccgcggta
aagcgcggcgcaagcgcggggcgtctggccgggacggttacggcccggcaggagcgcaag
acccgcaccggcaacaagatgggtatcgtgcagctttccgacgccagcggccagtttgag
gcggtcctgttttcggaagggctcgcacaatatcgcgatctgttggaaagcggcaaatcg
gtggtgatcacggtgcaggcggaaaaccggcctgaaggcatcggattgcgcattcagact
gtccagtcgctggaagacgaggcttgccgtatgcagaaggctatgcgactctatctgcgc
tcggctgatgcggtccgccacatcgcaccgcatttcaatacacgcggtgacggacaggtg
agcctcatcgtcatcaaggataacgggcagcgtgaggtggagatcgaattgccgcatcgc
tatcgcgtcagcccgcagatcgcgagcgccatgaaggctatccagggcgtcgtggaagtc
gagcttgtttag
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