Brachyspira intermedia: Bint_0560
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Entry
Bint_0560 CDS
T01847
Name
(GenBank) SQS PSY, Squalene/phytoene synthase-like protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bip
Brachyspira intermedia
Pathway
bip00100
Steroid biosynthesis
bip00909
Sesquiterpenoid and triterpenoid biosynthesis
bip01100
Metabolic pathways
bip01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bip00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Bint_0560
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Bint_0560
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bip01006
]
Bint_0560
Enzymes [BR:
bip01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Bint_0560
Prenyltransferases [BR:
bip01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Bint_0560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AEM21189
UniProt:
G0EJJ0
LinkDB
All DBs
Position
633835..634728
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AA seq
297 aa
AA seq
DB search
MLARIIDTIEDSTHSAEDKETLITAFINILKTENIDNLENFKNVVIAHSINENDRVLIEN
IDIVLKSFFTFKQEIKNISISYLREMGYGMVYYQDHTISTFEDLDDYCYYVAGTVGLYLT
ELSKILDNMELDREKAKSLGRFLQKVNIIKDAKLDYEEKRVFWPISLFENENPAPYFEDG
AYMDKSMEILVKMVESAMAEFRNSIEYIMAIDKKASGYRRFCLVAVLMGYESIKLMKSNY
NIFMGETVKIPRKNTLEIVAKAKADYYTNKRLEDLLEKVFTTESVQSESEIPANNNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgctagaataatagatacaatagaagattctactcatagtgcggaagataaagaa
acattaataactgcttttataaatatattaaaaacagaaaatattgataatttagaaaat
tttaaaaatgtagttatagcacattccataaatgaaaatgatagagtattaatagaaaat
atagatattgtgttaaaatctttttttacttttaaacaggagataaaaaatatatctatt
tcatatttaagggaaatgggttatggtatggtttattatcaggatcataccatatcaaca
tttgaagatttagatgattattgttattatgttgccggtactgtaggactttatcttact
gagctttcaaaaatattggataatatggaattggatagagagaaagctaaaagtttggga
agatttttgcagaaagttaatattattaaagatgctaaattagattatgaagagaaaaga
gttttttggcctataagtttatttgaaaatgagaatcctgctccatattttgaagatggt
gcttatatggataaatctatggaaatattagttaagatggtagaatcagctatggctgag
tttaggaattctatagaatatattatggcaatagataaaaaagcatctggttataggcgt
ttttgtttggtggctgttcttatggggtatgaaagtataaaacttatgaagagcaattat
aatatatttatgggtgagactgtaaaaattcctagaaaaaatactttagagatagttgca
aaagcgaaagctgattattatactaataagagattggaagatctattagaaaaagtattt
acaacagaatcagtacaaagtgaatccgaaatccctgcaaataataatgaataa
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