Brachyspira intermedia: Bint_0812
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Entry
Bint_0812 CDS
T01847
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bip
Brachyspira intermedia
Pathway
bip03030
DNA replication
bip03410
Base excision repair
bip03420
Nucleotide excision repair
bip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bint_0812 (polA)
03410 Base excision repair
Bint_0812 (polA)
03420 Nucleotide excision repair
Bint_0812 (polA)
03440 Homologous recombination
Bint_0812 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bip03032
]
Bint_0812 (polA)
03400 DNA repair and recombination proteins [BR:
bip03400
]
Bint_0812 (polA)
Enzymes [BR:
bip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bint_0812 (polA)
DNA replication proteins [BR:
bip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Bint_0812 (polA)
DNA repair and recombination proteins [BR:
bip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Bint_0812 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bint_0812 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
RNase_T
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AEM21439
UniProt:
G0EL61
LinkDB
All DBs
Position
911640..914285
Genome browser
AA seq
881 aa
AA seq
DB search
MRTYFSLINTYPAEYVAIALDSSRKTFRNEIYKEYKENRESMPDDLRSQIPILYNLIDAL
GISRIVLENYEADDIVGTIAEKNKKENIKTIIYSPDKDILQLVCDDVRVVASNKDNELME
YDAEAVKEKRGVYPNQIIDLLALMGDASDNIPGVKGVGEKTALKLLEEYKSLDGIYENID
SIKGKIQEKLLESKDMAYMSYKLATIERDIKDFNLDYNEIASSKINIDEVNKILDELELK
QIRDKINSYIYGSSSNKKAEKVKISDEKTNSNETVKEESPILSAKDNKASYYLIENETEL
ENLLKDINSKKLVCIDFETTGLDTFKDTIIGISFAIRSNEAFYLDLSGRTNIDKDKCMNL
VFDTLSKEDIKVIGHNLKYEYKMMRAIGKSLGNMYFDTMVAAYLINPTRGRYNMDDLAMA
YLSYNTIKYSDLTDNAKKTLLDAPLKDVVEYACEDADVTFRFYECFAPLLKTHNLEELFF
NIEMPLVSVLADMEFDGVYISSERMKALSDEYTSLLEKTKEKIYKEAGEEFNLQSPKQLE
YILFDKMGIPPTKKTKTGFSTDEEVLTELSQKYKIAEYMLTYRKYAKLKNTYLDVFPTLI
NEKTGRIHASFNQTVTATGRLSSSEPNLQNIPVRGEEGREIRNTFIPEKGNLLIAADYSQ
IELRLLAHFSNDPVLVEAFKNNDDIHRKTAMKIYSVSKEHVTASMRNIAKIINFSIIYGK
TAFGLSKELGIKRKEAEDFIKGYFSTYSRVKPFCEEVVEEVRNKGYVRTMCGRIRDLSKT
INSSNAMARNEAERMALNTLIQGSAADMIKVAMVAIHKEFKNHLKTAKIVMQVHDELVVE
VSEKEADKAMTIMKEIMEHSVKTNVPITVDIHKGNSWGEVH
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttatttctcgcttattaatacatatcctgctgaatatgttgctatagctttg
gacagttctagaaaaacttttagaaatgaaatatataaagagtataaagagaatagggag
agtatgcctgatgatttaagaagtcagatacctatactttataatcttatagatgcttta
ggtatatctagaatagtactagagaattatgaggctgatgatatagttggaactattgct
gagaaaaataaaaaagagaatataaaaactataatttattctcctgataaagatatactt
cagcttgtttgcgatgatgtaagagtggttgcaagcaataaagataatgagttaatggaa
tatgatgctgaggctgttaaagaaaagaggggagtttatcctaatcaaataatagattta
cttgcccttatgggtgatgcttctgataatatacctggagttaaaggagtaggagagaag
actgctttaaaacttcttgaagaatataaaagtttagacggtatatatgaaaatattgat
tctattaagggtaagattcaagaaaaactcttagaatcaaaagatatggcatatatgagc
tataaacttgctaccatcgaaagagatattaaagattttaatttagattataatgaaata
gcaagcagtaaaataaatattgatgaagttaataaaatattagatgaattagaattaaaa
cagataagagataaaattaattcatatatatatggttcttcttcaaataaaaaagctgaa
aaagtaaaaatatctgatgaaaaaacaaatagcaatgaaacagtaaaagaagaaagtcct
atacttagtgctaaagataataaggctagctattatttaatagagaatgaaacagaatta
gaaaatcttttaaaagatattaacagtaaaaaacttgtatgtatagattttgaaactaca
ggacttgatactttcaaagatactataataggaatttcatttgctataagatctaatgaa
gcattttatttagatttaagcggaagaactaatattgataaagataaatgtatgaatctt
gtatttgatactttatctaaagaagatataaaggttataggtcataatcttaaatatgaa
tacaagatgatgagagctattggtaaaagtttaggcaatatgtactttgatactatggtt
gctgcatatttgattaatcctacaagaggaagatacaatatggatgatttagctatggct
tatctttcatacaatacaatcaaatacagcgatttaactgataatgctaaaaagacatta
ttagatgcacctttaaaagatgttgttgagtatgcttgcgaagatgctgatgtaacattc
agattctatgaatgttttgctcctcttttaaaaactcataatcttgaagaattatttttt
aatatagaaatgcctttagttagcgtacttgctgatatggaatttgacggtgtttatata
agcagcgaaagaatgaaagcattatccgatgagtatacttcactattagaaaagactaaa
gagaaaatatataaagaagcaggagaagaatttaatttacaatctcctaaacagcttgag
tatatactattcgataaaatgggaatacctccaactaaaaaaacaaaaacaggtttctca
actgatgaagaagtattaacagaactttctcaaaaatacaaaatagcagaatacatgctt
acatatagaaaatatgcaaaattaaaaaatacttatcttgatgtgttccctactttgata
aatgaaaaaacaggaagaatacatgcttcattcaatcaaactgtaacagctacaggacgt
ttatcatcatcagaacctaatttgcagaatattccggtgagaggtgaagagggtagagag
ataagaaatacattcataccagaaaaaggcaatttacttatagcagcagactattctcaa
atagaattaagattattggcacatttcagtaatgatcctgtattagtagaagcattcaaa
aataatgatgatattcacagaaaaacagcaatgaaaatatattctgtgagcaaagagcat
gtaactgcatcaatgagaaatattgctaagataataaacttctctatcatttacggtaaa
acagcattcggactttcaaaagagcttggaataaaaagaaaagaagctgaagattttata
aaaggatatttttcaacatattcaagagtgaagcctttctgtgaggaagtagttgaagaa
gtaagaaataaaggctatgtaagaactatgtgcggaaggattagggatttatcaaagact
atcaattcttcaaatgctatggctagaaatgaggctgaaagaatggctttgaatactctt
attcagggaagtgctgctgacatgataaaggttgctatggttgctatacataaagagttt
aaaaatcatttgaagacagcaaaaatagttatgcaagttcatgacgaattagtagttgaa
gtttctgaaaaagaggctgacaaggctatgactataatgaaagagataatggagcattca
gtaaaaactaatgtgcctataactgttgatatacataaaggaaacagctggggagaggtt
cattaa
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