Brachyspira intermedia: Bint_2120
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Entry
Bint_2120 CDS
T01847
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bip
Brachyspira intermedia
Pathway
bip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bint_2120 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bip03019
]
Bint_2120 (pnp)
03016 Transfer RNA biogenesis [BR:
bip03016
]
Bint_2120 (pnp)
Enzymes [BR:
bip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Bint_2120 (pnp)
Messenger RNA biogenesis [BR:
bip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bint_2120 (pnp)
Transfer RNA biogenesis [BR:
bip03016
]
Prokaryotic type
tRNA degradation factors
Bint_2120 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_2
CsrA
OB_RRP5_4th
DUF4473
Motif
Other DBs
NCBI-ProteinID:
AEM22734
UniProt:
G0ELF8
LinkDB
All DBs
Position
2434363..2436483
Genome browser
AA seq
706 aa
AA seq
DB search
MFCGEELILETGLLAKQAHGSVTLRLGNTTILATVVAAKEPNLESDFFPLTVNYNEKYYA
GGKIPGGFFKREAKPRDKEILISRIIDRPLRPLFPEGFRNEVQIIPTVLSVDTDMPTDAL
ALIASSAALTISWIPFGGPVAAVRIGYKNGEYIINPKNSELATSELDIIVAGSKDAILMI
EGEAKEVSEEVFIGAIELAHKEMQKYIDMQNEMATLCGTQKIQQELFEFDAELVKMVTEY
GRNKIEAANYNPDKTKRNESMDNAFDEIEEYIKTQVEDEKLISQVKGICHSIEEEIVREA
IVEKGMRPDGRALDEIRPITTMTNLIPRVHGSALFTRGQTQCLSIVTLGSEKDAQLMDDI
YGKENKTFMLHYNFPPFSVGEVGRYGAPGRREIGHGNLAERSFNAVLPPKDKFPYTIRVV
AEILESNGSSSMATICASTMSLLSAGVPLNASVAGIAMGLATYKDGYKILTDIQGVEDHL
GDMDFKVAGTRKGITAFQLDIKLTGISAQILKEALEQAKKARYFILDKIDATIANAGEIS
DFAPKYKTMDVNPEKIRVLIGPGGKNIKAIIEETGSDVEIQDSGVVNIFAPDTPTLDKTI
KLINSYVKDPEVGEVYDGIVKDIKDFGAFVEILPGVEGLCHISELAYKHVMNVEEVLKIG
DEVKVKILDIKGGKYSLSRKALLEKPADYVEEEYNKKEKKHGKKRF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgttttgtggagaggagttaattttagaaaccggacttttagctaaacaggctcatggt
tctgtaactttgagacttggaaatacaactatattagcaactgttgtagcagctaaagag
cctaatttagaatctgactttttccctttaacagtaaattataatgaaaaatattatgca
ggcggtaaaattcctggcggtttcttcaaaagagaagcaaaacctagagataaagaaatt
cttatatcccgtatcatagacagacctttaagacctcttttccctgaagggtttagaaat
gaagttcaaataatacctacagtactttctgtagataccgatatgcctactgatgcttta
gctttaatagcttcatctgcagcacttacaatctcttggatacctttcggcggaccagtg
gcagctgtaagaataggatataaaaacggcgaatatataataaaccctaaaaatagcgaa
cttgctactagcgaattggatattattgttgctggaagtaaagatgctatattaatgatt
gaaggtgaagcaaaagaagtttctgaagaagtattcatcggagctatagaattagcacat
aaagaaatgcagaaatatattgatatgcaaaatgaaatggctactctatgcggaacacaa
aaaatacaacaggaattatttgaatttgatgctgaattagtaaaaatggttactgaatac
ggtagaaataaaattgaagccgctaattataatcctgacaaaaccaaaagaaatgaaagt
atggataatgcttttgacgaaatagaagaatatatcaaaactcaagtggaagatgagaaa
ttaatatctcaagttaaaggtatttgtcattctatagaagaagaaatagttagagaggct
atagtagaaaaaggtatgcgtcctgacggaagagcattagatgaaattcgtcctataact
actatgacaaaccttattcctagagtacatggttctgctcttttcactagaggacaaact
caatgtttatccatagttacattaggaagcgagaaagacgctcaattaatggacgatata
tacggcaaagaaaataaaacattcatgcttcattataatttccctccattctctgttgga
gaagttggaagatacggtgctcccggaagaagagaaataggacatggaaatttagcagaa
cgttctttcaatgctgtacttcctccaaaagataaattcccatatactataagagtagtt
gctgaaatattagaaagtaatggttcttcatcaatggctactatatgtgcttctactatg
tcattactttcagcaggtgttcctcttaatgccagcgttgcaggtattgccatgggactt
gctacatacaaagacggctataaaatacttacagatatacaaggggtagaagatcattta
ggagatatggatttcaaagtggcaggaactcgtaaaggtattactgctttccaattggat
attaaacttacaggaatctctgctcagatattaaaagaagcattagagcaggctaaaaaa
gcaagatattttatacttgataaaatagatgctactatagctaatgcaggagagatttct
gattttgctcctaaatacaaaactatggatgttaatcctgaaaaaataagagtattaata
ggacctggcggaaaaaatataaaagctataatagaagaaactggaagcgatgtagaaata
caagacagcggtgtagttaatatatttgctcctgacactcctactctagataaaactata
aaacttatcaactcttatgttaaagatcctgaagttggagaagtttatgacggaatagtt
aaagacatcaaagatttcggtgctttcgttgagatacttcctggtgtagaaggtctttgt
catatatctgaacttgcttataaacatgttatgaatgtcgaggaagttctaaaaatcggt
gatgaagtgaaagtaaaaatattagatatcaagggcggcaaatattctttaagcagaaaa
gcattacttgaaaaacctgctgattatgttgaagaagaatataacaaaaaagaaaaaaaa
catggtaaaaaaagattctaa
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