Bacillus inaquosorum: AN935_08645
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Entry
AN935_08645 CDS
T07179
Symbol
polC
Name
(GenBank) DNA polymerase III subunit alpha
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
biq
Bacillus inaquosorum
Pathway
biq03030
DNA replication
biq03430
Mismatch repair
biq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
biq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AN935_08645 (polC)
03430 Mismatch repair
AN935_08645 (polC)
03440 Homologous recombination
AN935_08645 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
biq03032
]
AN935_08645 (polC)
03400 DNA repair and recombination proteins [BR:
biq03400
]
AN935_08645 (polC)
Enzymes [BR:
biq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AN935_08645 (polC)
DNA replication proteins [BR:
biq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AN935_08645 (polC)
DNA repair and recombination proteins [BR:
biq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AN935_08645 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DEDDh_C
Zn-ribbon_8
zinc_ribbon_2
YhfH
Motif
Other DBs
NCBI-ProteinID:
AMA52348
LinkDB
All DBs
Position
1699979..1704292
Genome browser
AA seq
1437 aa
AA seq
DB search
MEQLSVNRRQFQILLQQINMTDDTFMTYFEDGEIKKLTIHKATKSWHFHFQFKSLLPFQI
YDTLTMRLTQSFAHIAKVTSSIEVQDAEVSESLVQDYWSRCIEELQGISPPIISLLNQQK
PKLKGNKLIVKTKTDTEAAALKNKYSSMIQAGYRQFGFPDLQLDAEIFVSEQEVQKFREQ
KLAEDQERAMQALIEMEKKDKESDEDQAPSGPLVIGYQIKDNEEIRTLDSIMDEERRITV
QGYVFDVETRELKSGRTLCIFKITDYTNSILIKMFAREKEDAALMKSLKKGMWVKARGSI
QNDTFVRDLVMIANDVNEMKAKTREDTAPEGEKRVELHLHSPMSQMDAVTGIGKLVEQAK
KWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANLVDDGVPIAYNAAHRLLEEET
YVVFDVETTGLSAVYDTIIELAAVKVKGGEIIDKFEAFANPHRPLSATIIELTGITDDML
RDAPDVVDVIRDFREWIGNDILVAHNASFDMGFLNVAYKKLLEVEKAKNPVIDTLELGRF
LYPEFKNHRLNTLCKKFDIELTQHHRAIYDTEATAYLLLKMLKDAAEKGIQYHDELNENM
GQSNAYQRSRPYHATLLAVNSTGLKNLFKLVSLSHIHYFYRVPRIPRSQLEKYREGLLIG
SACDRGEVFEGMMQKSPEEVEDVASFYDYLEVQPPEVYRHLLELELVRDEKSLKEIIANI
TKLGEKLNKPVVATGNVHYLNDEDKIYRKILISSQGGANPLNRHELPKVHFRTTDEMLEA
FSFLGEEKAKEIVVTNTQKVASLIDDIKPIKDDLYTPKIEGADEEIREMSYQRARSIYGE
QLPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI
TEVNPLPPHYVCSECQHSEFFNDGSVGSGFDLPDKTCPHCGTPLKKDGHDIPFETFLGFK
GDKVPDIDLNFSGEYQPQAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYAGDNNLH
MRGAEVDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATGSEWKTTHFDF
HSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIG
CKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNICELS
EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKNNNVPDWYIDSCKKI
KYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKGSTAIKAVMED
INSKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSATEFIIDGNSLIPPFNSIP
GLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttatcagtaaacagaaggcagtttcaaattcttctgcagcagattaatatg
acagatgataccttcatgacatactttgaagatggcgagattaaaaagctgacgatacac
aaagcgacaaagtcttggcattttcattttcaatttaaatctttgctgccttttcaaata
tatgacacattaacaatgaggctgacgcaatcgtttgcccacatagcaaaagttacatct
tcaatcgaagtgcaagatgcagaggtcagcgaaagtcttgtacaagactactggtcacgc
tgcattgaagaattgcaaggcatttcgccgccgattatcagtctattaaaccagcaaaaa
ccgaagctgaagggcaataaactgattgtcaaaacaaaaacggatacggaagctgctgca
cttaagaacaaatatagttccatgattcaagcaggctaccgtcaatttggtttcccggac
cttcaacttgatgccgaaatatttgtatccgagcaagaagttcaaaagtttcgggaacaa
aagcttgcagaagaccaagagcgggccatgcaagcgctgattgaaatggagaagaaagac
aaagaaagtgatgaagatcaagcgccatctgggcctcttgtcatcggttatcaaattaaa
gataacgaagaaatccggacacttgacagcatcatggacgaagaacggagaattacggtt
cagggttatgtgtttgatgtggagacccgagagctgaaaagtgggcgcacgctatgcatc
ttcaaaattacagactacacaaatagtattttaatcaaaatgtttgcacgtgaaaaagaa
gatgcggcactgatgaagtctctgaaaaaaggaatgtgggtaaaagcacgcggaagtatt
caaaatgacactttcgtcagagatctcgtcatgatcgcaaatgacgtaaatgaaatgaaa
gcgaaaacccgcgaagatacggctcctgaaggagaaaaaagagtggaattgcacctgcat
tccccgatgagccaaatggatgctgtgacgggtatcggaaagcttgtcgaacaggcaaaa
aaatgggggcatgaggccattgctttgactgaccatgctgtcgttcaatccttccctgat
gcgtattctgccgccaagaagcatggaattaaaatgatctacgggatggaggcgaatctt
gttgatgacggcgtgccaattgcttataacgctgcacaccgtctgcttgaggaagaaaca
tacgttgtttttgacgtcgagacaacaggactgtctgctgtatacgataccattattgag
ctggctgcagtaaaagtaaaaggcggagaaattattgataaatttgaggcgtttgcgaac
ccgcatcgtccgctttcagccacaatcatagagcttactggcatcaccgatgatatgctt
cgcgacgctccggatgtcgtagacgtgataagagatttcagagaatggatcggcaatgat
atccttgtcgctcataatgcgagctttgatatgggattcttaaatgtagcctataaaaag
cttcttgaagtcgaaaaagctaaaaacccagtcattgatacgcttgagctaggccgtttt
ctctatccggaatttaagaaccaccgtctgaacacactctgtaaaaagtttgatatcgaa
ctcacacagcaccaccgtgcgatatacgatactgaagcgacggcttatttgctcctgaaa
atgctgaaggacgcagctgaaaaaggcattcagtaccatgatgagctgaatgaaaatatg
ggacagtccaacgcttatcaaagatcaagaccgtatcatgcaacattacttgctgtgaac
agcacggggcttaaaaatttatttaagcttgtgtcactttctcatattcattatttttac
agagtgcctcgtattccgagatctcaacttgagaaatacagggaagggcttctgatcggt
tcggcctgtgacaggggagaggtttttgaagggatgatgcaaaaatcgcctgaagaggtt
gaagatgtcgcgtcattctatgattatcttgaggttcagccgcctgaagtgtaccgtcac
ttgctagagcttgagctggtccgtgatgaaaagtcgctgaaagaaattattgcgaatatc
acgaaactgggtgaaaagcttaataaaccggttgttgctacgggaaatgttcattacttg
aatgatgaggataaaatctacagaaagattttaatatcctctcaaggcggggccaatccg
ctgaacaggcatgaactgccgaaagtgcatttcagaacgacagacgaaatgcttgaagca
ttttctttcttaggcgaagaaaaagcgaaggaaatcgttgtcaccaatacccaaaaggtt
gcttctttaattgatgacatcaagccgattaaagatgatttgtatacaccgaaaatcgaa
ggcgctgatgaagagatcagagaaatgagctatcagcgtgcaagaagcatttacggcgaa
cagctgcctgaaattgtagaagcgcggattgaaaaagaattaaagagtatcattggacac
ggcttcgctgttatttatttgatctctcacaaacttgtaaaacgttcactagatgacggg
tatctcgtaggttcccgtggttccgtaggatcttcattagttgcgacgcttactgagatc
actgaggtgaacccgctgccgccgcactatgtatgctctgagtgccagcattctgagttc
tttaatgatggttctgtcggttccggttttgacctgcctgacaagacatgtcctcattgc
ggaacgcctttgaaaaaagacggccatgatattccgtttgaaacgttcttaggatttaaa
ggggacaaagtacctgatatcgatttgaacttctcaggggaatatcagccgcaagcacac
aattacacaaaagtattgttcggagaagacaatgtatatcgtgcgggaacaataggcact
gttgcagaaaaaacagcttatggttatgtaaaaggctatgccggagacaataaccttcac
atgcgcggggccgaagtagatcggctcgtacagggatgtacaggtgtaaaacggacgact
ggacagcaccctgggggtattatcgttgttccagattatatggatatttatgatttttca
ccaattcagttcccggcagatgccacgggttcggagtggaaaacgactcattttgatttc
cactccattcatgacaacctgttgaaactcgatattctcggacacgatgacccgaccgtc
attcggatgcttcaggacttaagcggaattgatccgaaaacaattccaacagatgatcct
gaagtgatgaagatcttccagggaaccgaatcactcggtgttacagaagaacagatcggc
tgtaaaacgggcactcttggaatcccagaattcggaacccgatttgtccggcagatgctt
gaagacacaaagccgacaactttttccgagctcgttcagatttcgggcttgtctcacgga
actgatgtatggctcggcaatgcgcaagagctcatccacaataatatttgtgagctgagt
gaggttatcggctgccgtgatgacattatggtttacttaatctatcagggccttgagccg
tcccttgcctttaaaatcatggaatttgtgcgtaaaggaaaaggattaacgcctgaatgg
gaagaagaaatgaaaaataacaatgtcccagactggtatattgattcttgtaaaaagatt
aaatacatgttcccgaaagcccacgccgcagcttatgtattaatggcagtccgcattgct
tactttaaagtccatcacgcgcttttgtattatgcggcttattttaccgttcgtgcagac
gattttgatatcgatacaatgatcaagggttctacagcaatcaaggctgtaatggaggat
attaactctaaaggacttgatgcttcaccgaaggaaaaaaaccttctcactgttttagaa
ttagcgcttgaaatgtgtgaaagaggctattcattccaaaaagtcgatttatatcgctcc
agcgctacagagtttattattgacggcaacagtcttatcccgccgtttaactccattcct
ggattagggacgaacgccgctctgaacattgtaaaggctcgtgaagaaggcgaattcctc
tcgaaagaagatttacaaaagagagggaaagtgtcaaaaacgattctagagtatttagat
cgtcatggctgcttggaatcactgcctgatcaaaaccaattgtcactgttctaa
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