KEGG   Bacillus inaquosorum: AN935_08970
Entry
AN935_08970       CDS       T07179                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
biq  Bacillus inaquosorum
Pathway
biq02024  Quorum sensing
biq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:biq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AN935_08970
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AN935_08970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:biq03019]
    AN935_08970
   03036 Chromosome and associated proteins [BR:biq03036]
    AN935_08970
Messenger RNA biogenesis [BR:biq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AN935_08970
Chromosome and associated proteins [BR:biq03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    AN935_08970
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: AMA52410
UniProt: A0A9Q4HS70
LinkDB
Position
1766881..1767102
AA seq 73 aa
MKPINIQDQFLNQIRKENTYVTVFLLNGFQLRGQVKGFDNFTVLLESEGKQQLIYKHAIS
TFAPQKNVQLELE
NT seq 222 nt   +upstreamnt  +downstreamnt
atgaaaccgattaatattcaggatcagtttttgaatcaaatccggaaagaaaatacgtat
gtcactgtttttttgctgaatggctttcagttgcgtggccaagtgaaaggctttgataac
tttaccgtattgctggaatcggaagggaagcagcagcttatatataaacatgcgatctca
acgtttgcgccgcaaaaaaacgtccagcttgaactcgaatag

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