Bacillus inaquosorum: AN935_14625
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Entry
AN935_14625 CDS
T07179
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
biq
Bacillus inaquosorum
Pathway
biq03030
DNA replication
biq03430
Mismatch repair
biq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
biq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AN935_14625 (dnaE)
03430 Mismatch repair
AN935_14625 (dnaE)
03440 Homologous recombination
AN935_14625 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
biq03032
]
AN935_14625 (dnaE)
03400 DNA repair and recombination proteins [BR:
biq03400
]
AN935_14625 (dnaE)
Enzymes [BR:
biq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AN935_14625 (dnaE)
DNA replication proteins [BR:
biq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AN935_14625 (dnaE)
DNA repair and recombination proteins [BR:
biq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AN935_14625 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
DNA_pol_IIIA_C
DUF3860-like
Motif
Other DBs
NCBI-ProteinID:
AMA54746
LinkDB
All DBs
Position
complement(2870235..2873582)
Genome browser
AA seq
1115 aa
AA seq
DB search
MSFVHLQVHSGYSLLNSAASVEELVKEADRLGYASLALTDDHVMYGAIQFYKACKARGIN
PIIGLTASVFTDDNELEAYPLVLLAKSNTGYQNLLKISSVLQSKSKGGLKPKWLNSYREG
IIAMTPGEKGYIEMLLEGGLFEQAAQAALEFQSIFGKGAFYFSYQPFKGNKALSDQILRL
SEETGIPVTASGDVHYIRKEDKAAYRCLKAIKAGEKLTDEPAGDQPDLDLKPLEEMQNIY
REHPEALQASVEIAEQCRVDVSLGQTRLPSFPTPDGTSADAYLTDICMAGLRSRFGTPDE
RYLRRLQYELDVIKRMKFSDYFLIVWDFMKHAHEKGIVTGPGRGSAAGSLVAYVLYITDV
DPIKHHLLFERFLNPERISMPDIDIDFPDTRRDEVIQYVQQKYGAMHVAQIITFGTLAAK
AALRDVGRVFGVSPKEADQLAKLIPSRPGMTLEEARQQSPQLDKRLRESSLLQQVYTIAR
KIEGLPRHTSTHAAGVVLSEEPLTDVVPLQEGHEGIYLTQYAMDHLEDLGLLKMDFLGLR
NLTLIESITSMIEKEENIKIDLSNISYQDGKTFSLLSKGDTTGIFQLESSGMRSVLKRLK
PSGLEDIVAVNALYRPGPMENIPLFIDRKHGRAPVQYPHEDVRSILEDTYGVIVYQEQIM
MIASRMAGFSLGEADLLRRAVSKKKKEILDKERSHFVEGCLKKEYSVDTANEVYDLIVKF
ANYGFNRSHAVAYSMIGCQLAYLKAHYPLYFMCGLLTSVIGNEDKISQYLYEAKGSGIRI
LPPSVNKSSFPFTVEDGSVRYSLRAIKSVGVSAVKDIYKARKEKPFEDLFDFCFRVPSKS
VNRKTLEALIFSGAMDEFGQNRATLLASIDVALEHVELFAADDDQMGLFLDESFSIKPKY
VETEELPLVDLLAFEKETLGIYFSNHPLSAFRKQLAAHGAASILEAQQAVKRQLSLGVLL
SKIKTIRTKTGQNMAFLTLSDETGEMEAVVFPEQFRQLSPVLREGALLFTAGKCEIRQDK
VQFIMSRAELLENMDAEKAPSVYIKIESSQHSQEILAKIKRILLEHKGETGVYLYYERQK
QTIKLPESFHIDADHQVLYRLKELLGHQNVVLKQW
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttcacctgcaagtgcatagcgggtacagcctgctaaacagcgccgcgtcc
gtggaagagctcgtcaaagaagctgacaggctcggatatgcgtctttggcgctgacagat
gatcatgtcatgtacggagctattcaattttataaagcatgcaaggcgaggggaatcaac
ccgataatcggtttgacggcctctgtttttactgatgataacgagcttgaagcctatccg
ctcgtcctgctggccaaatcaaatacaggctatcaaaacctgctgaaaatcagcagcgtc
ctgcaatcgaaatcaaaaggcgggctaaagccgaaatggcttaacagttatcgagaaggc
attatcgcgatgacgcccggcgaaaaaggatatattgaaatgcttcttgaaggagggctg
tttgaacaggccgctcaagccgcgcttgaatttcaatccatattcggaaagggagctttc
tatttctcctatcagccttttaaagggaataaagccttgtctgaccagatactgcggctg
tctgaagaaacgggtatccctgttacagcgtctggcgatgtgcattacataaggaaagaa
gataaggctgcctaccgctgtctgaaagcgattaaagcaggggagaaactgacggatgaa
ccagccggagatcagcctgatctcgatttgaagccactcgaagaaatgcaaaacatttat
cgagagcatcccgaagcactgcaagcttctgttgagatcgcagaacaatgccgggttgac
gtcagcctcggacagacccgtctcccatctttcccgactccagacggaacgtccgctgat
gcttatttaacggacatctgtatggcaggactccgcagccgttttggcacgcctgatgaa
cgatatcttcgccgtcttcaatatgagcttgacgtcatcaagcggatgaagttcagcgat
tactttctgatcgtatgggattttatgaaacacgcccatgaaaaaggaatcgttacagga
ccgggaaggggatctgcggcaggctctcttgtggcttatgtgctgtatattacagatgtt
gacccgattaaacatcacctgctgtttgaacgatttttaaaccccgaacggatcagcatg
ccggatattgatattgactttccggatacaagaagagatgaagtcatccaatatgttcag
cagaaatacggtgcaatgcacgtcgcacagattattacctttggaacacttgcggcaaaa
gcggcactccgggacgtcggcagagtattcggcgtcagccctaaggaagcagatcagctt
gcaaaactcatcccttcaaggccgggcatgacgctggaggaagcgagacagcaatcgccg
cagctggataagaggcttcgggagtcaagcctgcttcagcaagtctatacaattgcccga
aaaatagaagggctgccaaggcatacctcaacccacgcagcaggtgttgtcctgagtgaa
gaaccgttaacggatgttgttccacttcaggaagggcatgaagggatatatttgacgcaa
tacgcgatggaccatcttgaagacttgggtcttttaaaaatggatttcttaggcttacgc
aacctgacgcttatcgagtccattacttcaatgatcgaaaaagaagaaaacatcaaaata
gatctttcaaatatttcctaccaggatggcaaaacgttctccttgctgtcaaaaggggat
acgacagggattttccagcttgaatcgtcggggatgagaagcgtcctgaagcggcttaaa
ccttcaggcctcgaggatattgtggcggtcaatgcgctgtaccggcctggtccgatggaa
aatattccgttatttatcgaccgtaaacacggccgggcgcctgttcaatatccccatgaa
gatgtaaggagcatcttggaagatacatatggcgtcattgtgtatcaggaacaaattatg
atgattgcttcccggatggcagggttttctttaggagaagcagacctgctgagacgggcg
gtcagcaaaaagaaaaaagaaatcctggacaaagagcgaagccattttgttgaagggtgc
ttaaaaaaggagtattctgtagacactgcaaatgaagtctacgatttaatcgtcaaattc
gcaaactacggctttaaccgaagccatgcggtggcatacagcatgatcgggtgccagctt
gcgtatttgaaagctcattatccgttatattttatgtgcggattgctgacaagcgtcatt
ggcaatgaggataaaatatctcaatatctttacgaagcaaaggggagcgggattcgtatc
cttcctccgtcagtgaacaaaagcagttttccgtttacagttgaagacggatctgtcaga
tacagcctccgcgcgataaaaagtgtaggcgtctcagcagtcaaagatatatataaagca
agaaaagagaaaccatttgaagatcttttcgatttctgctttcgcgtgccgtcaaaaagc
gtaaatcgcaaaacgcttgaagcacttatcttttctggtgcgatggacgaattcggccaa
aaccgggccacgctgctcgcatccattgacgttgctttggaacatgttgagctatttgcc
gcggacgatgaccaaatgggattgtttttagatgaatcattttcgattaagccgaagtat
gtggagacggaggagctaccgcttgtagatttgcttgcgttcgaaaaagaaacgcttggc
atttatttttcaaatcatccgctctctgccttccgaaaacagctggctgcgcacggagca
gcatccattctagaggcacagcaggcagtcaaaaggcagctttctctcggagtcctgctg
tcgaagatcaaaacgattcggacgaaaacaggtcaaaacatggcgtttttaacgctaagt
gatgaaaccggcgaaatggaagctgttgtcttcccagaacaattcagacagctttctccc
gttttaagagaaggcgctcttttgttcacagcgggtaaatgtgaaataagacaggacaag
gtccagttcattatgtcccgggcagaattgttagaaaacatggatgccgaaaaagcgcca
tcggtttatataaagatagaaagcagtcaacacagtcaggaaatcctggcaaaaattaag
cgcattttgctggagcataaaggggaaacaggtgtttatctctattatgaaaggcaaaaa
cagacgattaagcttcctgagtcgtttcatatcgatgcggatcaccaggtgttatatcgc
ttaaaagagctgttaggtcaccaaaacgtcgttttaaaacagtggtaa
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