Bacillus inaquosorum: AN935_17210
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Entry
AN935_17210 CDS
T07179
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
biq
Bacillus inaquosorum
Pathway
biq02020
Two-component system
biq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
biq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AN935_17210
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AN935_17210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biq03021
]
AN935_17210
Transcription machinery [BR:
biq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AN935_17210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MarR_2
HTH_17
HTH_23
YtzH
Sigma70_r4
HTH_21
HTH_IclR
HTH_32
Motif
Other DBs
NCBI-ProteinID:
AMA53926
LinkDB
All DBs
Position
complement(3379178..3380488)
Genome browser
AA seq
436 aa
AA seq
DB search
MDMKLQQVQVLKPQLTQELRQAITLLGYHSAELAEYIDELSLENPLIERKESDTPPLSYH
KINKNRMNAQEAGLQLSDPQKTLQDVLKQQSLDMNLTNSEKKIFNYLIHSLDSNGYLEEE
VEEAARRLSVSIKEAEAVLAKLQSLEPAGIGARSLQECILLQLQRLPNRNEQAEMLVSAH
FDAFAQKNWKALSKETGIPLHTIQDISDDIAALHPRPGLLFAQPEQDVYIEPDIFITVKN
GHIAAELNTRSFPEIDLHPQYRTLLSSGSCQDTASYLSAKYQEWRWLSRALRQRKQTITR
IINELITRQKDFFLKGRSAMKPLTLREVADCLSLHESTVSRAIKGKTMQTPYGLFEMKLF
FSAKAEASGDGDASNYAVKTHLEDLINQEDKTKPLSDQKLADLLYEQHGIQISRRTVAKY
RDQMNIPSSASRKRYK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaaacttcagcaagtacaagtattaaagcctcaactgacacaggagctcagg
caggccatcacgctgcttggctatcattcggcagaactcgccgaatacattgatgagctc
tcactggaaaaccctcttattgaacgaaaggaatcagacacaccgccactatcttaccat
aaaataaacaaaaacaggatgaatgcacaggaagcaggccttcaattaagtgatccgcaa
aaaacactgcaggatgtgttaaaacagcagtcacttgatatgaatctgacaaactccgaa
aaaaagattttcaattatctgattcattcgcttgattcgaacgggtacttggaagaagaa
gtggaggaggcagcacggcgactatcggtttcaatcaaggaagcggaagctgttttggca
aaactccagtcgttagagccggctggaatcggcgcaagatctctgcaggaatgtatcctt
cttcaattacagcggctgccgaacagaaatgaacaagcggaaatgcttgtttcagctcat
tttgatgctttcgcgcaaaaaaactggaaagcgctttcaaaagaaacgggaattccgctt
cataccattcaagatatctctgatgacatcgcagctcttcatccaagaccgggccttcta
tttgcccagccagagcaagatgtgtatatcgagcctgacatttttatcaccgtgaaaaac
gggcacatcgcagcggagctgaatacccgctcgtttccagagatagacctgcatccgcag
tacagaacgcttttatcgtccggctcctgtcaggataccgcctcttatttatctgcgaaa
tatcaggaatggcgctggctgagccgcgcgctgcgacagcgaaagcagacgatcacgaga
atcataaatgaactgatcacacggcaaaaggatttctttctgaaaggacgaagtgcaatg
aagccgctgactctcagggaggtagcggactgcctaagccttcatgaatcaactgtgagc
cgggcaattaaagggaaaacgatgcaaacgccgtacggactgtttgagatgaaactcttt
ttctcagcaaaagccgaggcttcaggagatggagatgcatctaactatgcagtcaaaacg
catcttgaagacctgatcaatcaagaggacaaaacaaaaccgctctcagatcaaaagcta
gctgatttgctatatgaacagcacggcatccaaatctccagacgaaccgtggcaaaatac
cgcgatcaaatgaacattccgtcatcggcgtcgagaaaacggtataaataa
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