Brevundimonas intermedia: ACETKC_03310
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Entry
ACETKC_03310 CDS
T10735
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
bir Brevundimonas intermedia
Brite
KEGG Orthology (KO) [BR:
bir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bir03021
]
ACETKC_03310 (rpoH)
Transcription machinery [BR:
bir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACETKC_03310 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r3
HTH_3
HTH_11
KORA
HTH_19
GntR
Sigma70_r4_2
HTH_15
NirdL-like_HTH
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
XGI87094
LinkDB
All DBs
Position
complement(648429..649316)
Genome browser
AA seq
295 aa
AA seq
DB search
MAANSTLAVMSPEQGLSRYLTEIRKFPMLTKDEEFMLAKRWSEHQDPEAAHRLVTSHLRL
VAKIAMGYRGYGLPIGEVISEGNVGLMQAVKKFDPDKGFRLATYAMWWIRASIQEYILRS
WSLVKMGTTAAQKKLFFNLRKAKSQISAFEEGDLHPEHLAAIATKLGVSEEEVTNMNRRL
GGDASLNAPLRADGESEWQDWLADDTAVSQETQLAEDEEKGIRMSLLQEAMEELTDREKH
ILTERRLKDDPVTLEELAGEYGVSRERVRQIEVRAFEKLQKAMRAAAEERNLVDA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaatagtacgctcgcggtgatgtcgcctgaacaaggcctctcgcgttatctg
acggaaatccgcaagtttccgatgctgaccaaggacgaggagttcatgctcgccaagcgt
tggtcggaacaccaggaccccgaagccgcccaccgtctcgtgacctcgcaccttcgtctt
gtggccaagatcgccatggggtatcgcggctacggcctgccgatcggcgaagtgatttcg
gagggcaacgtcggccttatgcaggccgtcaagaaattcgacccggacaagggcttccgc
ctggcgacctacgccatgtggtggatccgcgcctcgatccaggaatacatcctgcgtagc
tggtcgctcgtgaagatgggcaccaccgccgcgcagaagaagctgttcttcaacctgcgc
aaggccaagagccagatctcagccttcgaggaaggcgacctgcaccctgaacacctcgcc
gccatagccaccaagctgggcgtcagcgaggaagaggtcaccaacatgaaccgccgcctc
ggcggcgacgcctcgttgaacgcgccgctgcgcgccgacggcgaaagcgaatggcaggac
tggctggccgacgatacggctgtatcccaagaaacccaactcgccgaagacgaggaaaag
ggcatccgcatgagcctgctccaggaggccatggaggagctaaccgatcgggaaaaacac
atcctgacggaacgtcgtctaaaggatgatcccgtcaccctggaagagctggctggcgaa
tacggcgtgtcgcgcgaacgcgtccgccagatcgaggtccgtgccttcgaaaagctgcaa
aaggccatgcgcgccgccgctgaggagcggaatctggtcgacgcctga
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