Brevundimonas intermedia: ACETKC_05220
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Entry
ACETKC_05220 CDS
T10735
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bir Brevundimonas intermedia
Brite
KEGG Orthology (KO) [BR:
bir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bir03032
]
ACETKC_05220
03400 DNA repair and recombination proteins [BR:
bir03400
]
ACETKC_05220
Enzymes [BR:
bir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACETKC_05220
DNA replication proteins [BR:
bir03032
]
Prokaryotic type
DNA Topoisomerases
ACETKC_05220
DNA repair and recombination proteins [BR:
bir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACETKC_05220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
PB1
Motif
Other DBs
NCBI-ProteinID:
XGI87449
LinkDB
All DBs
Position
complement(1061265..1062299)
Genome browser
AA seq
344 aa
AA seq
DB search
MADGSHSFDTAFDGAVEVPQGLSWCSDDNPGLTRRRAGKGWSYRDAKDQPIKDPRVLDRI
RALAIPPAWTDVWICPKANGHIQATGRDVKGRKQYRYHAGWSSARSENKFDKLPAFSRAL
PKLRAQVEHDLGLRGPVKEKVLATAVRLLEITLIRVGNATYARQNRSYGLTTLNKRHLEV
DGSALTFEFRGKSGKDHRVSVRDRRLARLVRALEELPGQHLFKYRTADGDLCPVTSDDVN
AYIRAAMGDQFSAKDFRTWAGTVSAARALREMEPPTSPTDAKRKITVCVKAVSGLLGNTP
TVCRASYVHPRVMALFESGALKTALPGPDAKGFETALIRLLRAT
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggatcgcatagcttcgacacggccttcgacggggcggtcgaggttccgcag
gggttgagctggtgcagcgacgacaaccccggcctgacccgccgacgcgccggcaagggc
tggtcctatcgcgacgccaaggatcaaccgatcaaggatcccagggttctggaccggatc
cgggccctggccattccgcccgcctggaccgacgtctggatctgccccaaggccaacggc
catatccaggcgaccgggcgcgacgtgaagggacgaaaacagtaccgctatcacgcgggc
tggagttcggcccggtcggagaacaagttcgacaagctgccggccttttcgcgcgccctg
cccaagctgcgcgcccaggtggagcatgatctgggcctgagggggccggtgaaggaaaag
gtgctggccaccgccgtgcgcctgctggagatcaccctgatccgggtcggcaatgcgacc
tacgcccggcagaaccgcagctatggcctcacgaccctgaacaagcggcatctggaggtg
gacgggtcggccctgaccttcgagttccggggcaagagcggcaaggaccaccgggtcagc
gtccgcgatcggcggctcgcgcggctggtgcgggcgctggaggaactgccgggtcagcac
ctgttcaaataccgcacggccgacggcgacctgtgccccgtcacctcggacgatgtgaac
gcctatatccgcgcggccatgggcgaccagttctcggccaaggatttccgcacctgggcc
ggcacggtctcggcggcgcgcgccctgcgcgagatggagcccccgacctcgcccaccgac
gcgaaacgcaagatcaccgtctgcgtcaaggcggtgtcgggtctgctgggcaatacgccg
acggtgtgccgggcctcctatgtgcaccccagggtgatggctctgttcgagagcggcgcg
ctgaagacagccctgcccgggcccgacgccaaagggttcgagacggcgctgatccggttg
ttgagggcgacctga
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