Brevundimonas intermedia: ACETKC_05690
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Entry
ACETKC_05690 CDS
T10735
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bir Brevundimonas intermedia
Pathway
bir03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bir00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACETKC_05690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bir03021
]
ACETKC_05690
03400 DNA repair and recombination proteins [BR:
bir03400
]
ACETKC_05690
Enzymes [BR:
bir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACETKC_05690
Transcription machinery [BR:
bir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACETKC_05690
DNA repair and recombination proteins [BR:
bir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACETKC_05690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HEPN-like_int
Motif
Other DBs
NCBI-ProteinID:
XGI87539
LinkDB
All DBs
Position
1137507..1138526
Genome browser
AA seq
339 aa
AA seq
DB search
MIERNWQELIRPEKPQIEIGSDAQRKARLVAEPLERGFGVTLGNALRRVLLSSLQGAAVT
AIQIDGVVHEFSSLEGVREDVVDIVLNIKQLALRMHAEGPKRMTLRATGPGVVTAGQIDV
PADIEVLNPDHVICTLDDGASVRMELTVQNGKGYVAAELNRPEDAPIGLIAVDALYSPVK
RVAYRVEPTRQGQSLDYDKLLLEVETNGAVTPVDAVAYAARILQDQLQIFITFEEPKKAV
EQSDGKPDLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEGEMLRTPNFGRK
SLNEIKEVLATMGLSLGMDVPNWPPENIEDLAKKFDDQI
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaagaaactggcaagagctgatccgtcccgagaagccgcagatcgagatcggt
tccgacgcccagcgcaaggcgcgcctggtggccgaacccctcgagcgtggcttcggtgtg
acgctcggcaacgcgctccgtcgcgttctgctgtcctcgctgcaaggcgcggctgtcacc
gccatccagatcgacggcgtcgtccatgagttctcgtcgctggaaggcgttcgggaagac
gtggtcgacatcgtcctgaacatcaagcaactggcgctgcgcatgcacgccgaaggcccc
aagcgcatgaccctgcgcgccacgggccccggcgttgtgacggccggccagatcgacgtg
ccggcggacatcgaggttctgaaccccgatcacgtcatctgcaccctggacgacggcgcg
tcggtccgcatggaactgaccgtccagaacggcaagggctatgtggccgcagagctgaac
cgtccggaagatgcgccgatcggcctgatcgccgtcgacgccctgtattcgccggtcaag
cgcgtcgcctatcgcgtcgagccgacccgtcagggccagtcgctggattacgacaagctg
ctgctggaagtcgaaaccaacggtgcggtcacgccggttgacgccgtggcctatgccgcg
cgcatcctgcaagaccagctgcagatcttcatcaccttcgaagagcccaagaaggctgtc
gagcagtcggacggcaagcccgacctgcccttcaacccggccctgctgaagaaggtggac
gagctggagctgtctgtccgttcggccaactgcctgaagaacgacaacatcgtctacatc
ggcgacctgatccagaagaccgagggcgaaatgcttcgcaccccgaacttcggccgcaag
tcgctgaacgagatcaaggaagttctcgcgaccatggggctcagcctcggcatggacgtg
ccgaactggccgcccgaaaacatcgaagacctggccaagaagttcgacgaccagatctaa
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