Brevundimonas intermedia: ACETKC_05815
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Entry
ACETKC_05815 CDS
T10735
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bir Brevundimonas intermedia
Pathway
bir03018
RNA degradation
Brite
Enzymes [BR:
bir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ACETKC_05815
Messenger RNA biogenesis [BR:
bir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACETKC_05815
Ribosome biogenesis [BR:
bir03009
]
Prokaryotic type
rRNA processing factors
ACETKC_05815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XGI87562
LinkDB
All DBs
Position
complement(1160814..1163570)
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AA seq
918 aa
AA seq
DB search
MSKTMLIDAAHPEETRVAIVDGRQIEEFDFESRAKRQLRGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFNEIHPDYYQIPVADREAIMAEAHDDDDDDDLGRESDDDADPEAALADEE
RLKRRLMRRYKIQDVIKRRQILLVQVVKDERGAKGAALTTWLSLAGRYCVLMPNTGKGGG
ISRKITNTSDRRRLKSAVAALEVPKGMGLIIRTAGAKRTKAEIKRDYQYLLRLWETIRET
TLASHAPSVIYEEENLVRRAVRDMFDKDFDGIQVEGVEGFKEARDFMRVLMPSQAKKVHL
YRGSRPLFAANGIEELLTQIHQPVVPLKSGGYLVINQTEALVAIDVNSGRATKERNVEQT
AFKTNMEAAEEAARQLRLRDLAGLVVIDFIDMDEGKNNRAVERVLKDALSSDRARIQMGR
ISPFGLMEISRQRRRLGVIEGATEACPHCQGTGRIRSAESAALMTLRAVDIEAGKNGAGV
VVLKVCTAVGLYILNHKRAYLQSLLERRGLNVIVQIDDSLGQGEHNIERTETNEDFVAPE
IELPNLDDDFDPSLYEDEDEDDDEEIVSDDDEDDVEALDREDSDDDEPRERAERSETGGR
DRGRGRNRRRRGGRRDEETVEIAETSDAADTLNLDDASDDEEDENGRRRRRGRRGGRRVR
EDGERDVYTWVRGRTPSLDDPYVWFDPLNPGRPEPRAERPERAERPLAAQAQVEGLDAVA
SDGASEEGGRSRRRRRRGRGRGGEAVAQEIKVENRATNEGMPPDGSPETPMAVIVEPTTD
TVEAGVPSIAPESQRRRVRRKSASAEAVIQAAPETEAVEVKAHVEPHPDTAIEPNEAPVE
GAPVELDVTPEEALTAEPVEVAPVEKPKPTVAPEPQPAVLAEPFVAPTPEIDVQAIIAED
PNQIVAPPAKPKRGWWRR
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaccatgctgatcgacgcggcccacccggaagaaacccgggtcgcgatcgtt
gacggacgccagatcgaggaattcgatttcgaatcccgggcgaagcgccagcttcgcggc
aacatctacctcgccaaggttacccgcgtagagcccagtctgcaggccgccttcgtcgag
tacggcggcaatcgccacggcttcctagccttcaacgaaatccaccccgactactaccag
atcccggtcgccgaccgcgaagccatcatggccgaagcgcacgacgatgacgatgacgac
gatctgggtcgcgaatccgacgacgacgccgatcccgaagccgccctggccgatgaagag
cggctgaagcgtcgcctgatgcgtcgctacaagatccaggacgtcatcaagcgtcgccag
atcctgttggtacaggtcgtcaaggacgaacgcggcgccaagggcgcggccttgaccacc
tggctgtcactggccggccgctactgcgtcctgatgcccaatacgggcaagggcggcggc
atcagccgcaagatcaccaatacctcggaccgtcgccgcctgaagagcgccgtcgcagcg
ctggaagtgcccaagggcatgggcctgatcatccgcacggccggcgccaagcgcaccaag
gctgagatcaagcgcgactatcagtatctgctgcgcctgtgggagacgatccgcgagacc
accctcgcctctcacgccccgtcggtcatctacgaggaagagaacctggtccgccgcgcc
gtgcgcgacatgttcgacaaggacttcgacggcatccaggtcgagggcgtcgagggcttc
aaggaagcgcgcgacttcatgcgtgtgctgatgccgtcgcaggccaaaaaggttcacctg
tatcgcggctcgcggcccctgtttgcggccaacggcatcgaagaactgctaacccagatc
caccagccggtcgtgccgctgaagtcgggcggctatctggtgatcaaccagaccgaagcc
ctggtggccatcgacgtcaactccggccgcgccaccaaggaacgcaacgtcgaacagacg
gcgttcaagaccaatatggaagcggccgaggaagcggcccgccagctgcgcctgcgcgac
ctcgccggcttggtcgtgatcgacttcatcgatatggatgagggcaagaacaaccgcgcc
gtcgagcgcgtgctgaaggacgctctgtcgtccgaccgcgcccgcatccagatgggccgg
atctcgcctttcggcctgatggagatcagccgccagcgccgtcgcctgggcgtgatcgag
ggcgccaccgaggcctgcccgcactgccagggcaccggccgaatccgctccgccgaatcc
gccgccctgatgaccctgcgtgcggtcgatatcgaagccggcaagaacggcgcgggcgtc
gtggtgctgaaggtctgcaccgccgtcggcctgtatatcctgaaccacaagcgcgcctat
ctgcagtcgctgctggaacgccgcggcctgaacgtcatcgtccagatcgacgacagcctg
ggccagggcgagcacaatatcgaacgcacggagaccaacgaggacttcgtcgcgcccgag
atcgaactgcccaacctcgacgacgacttcgacccgtccctttacgaagacgaggatgag
gacgacgacgaggagatcgtcagcgacgatgatgaggacgacgtcgaggcgctggatcgc
gaggacagcgacgacgacgagccgcgcgagcgggctgaacgcagcgagacgggcggtcgt
gatcgtggccgtggccgcaatcgtcgccgccgtggcggtcgtcgcgacgaggagaccgtc
gagatcgccgaaacctcggacgccgccgacacgctgaacctcgacgacgcctcggacgac
gaggaagacgagaacggccgccgccgtcgccgtggccgccgtggcggtcgccgcgtccgc
gaggacggcgagcgcgacgtctatacctgggtccgtggccgcaccccgtcgctggacgac
ccttacgtctggttcgacccgctgaaccccggacggcccgagccgcgcgccgaacgtccg
gaacgcgctgagcgtcccctggccgcccaggcccaggtcgaagggctagacgccgtggcg
tccgacggcgccagcgaggaaggcggccgttcgcgccgccgccgtcgtcgcggccggggt
cgtggcggcgaggccgtggcccaggagatcaaggtcgagaaccgcgccaccaacgaaggc
atgccgcctgacggctcgcccgagacgcctatggccgtgatcgtcgaaccgacgacagat
acggtcgaggccggcgtcccctccatcgcgccggaatctcagcgtcgtcgcgtccgccgc
aagtcggccagcgccgaggccgtgatccaggcggcgccggaaaccgaggccgtcgaggtc
aaggctcacgtagaaccgcacccggatactgcgatcgagccgaacgaggcgccggtcgaa
ggcgccccggtcgaactggacgtcacgcccgaagaagccctgaccgccgaaccggtcgag
gttgctccggtcgagaagcccaagcctacggtcgcgcctgagccccagcccgccgtcctg
gccgagcctttcgtcgctccgacgcccgagatcgacgttcaggcgatcatcgccgaagat
cccaaccagatcgtcgccccgcccgcaaagccgaagcgtggatggtggcgccgctga
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