Brevundimonas intermedia: ACETKC_06200
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Entry
ACETKC_06200 CDS
T10735
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bir Brevundimonas intermedia
Brite
KEGG Orthology (KO) [BR:
bir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bir03032
]
ACETKC_06200 (topA)
03400 DNA repair and recombination proteins [BR:
bir03400
]
ACETKC_06200 (topA)
Enzymes [BR:
bir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACETKC_06200 (topA)
DNA replication proteins [BR:
bir03032
]
Prokaryotic type
DNA Topoisomerases
ACETKC_06200 (topA)
DNA repair and recombination proteins [BR:
bir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACETKC_06200 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
KARI_N
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XGI87637
LinkDB
All DBs
Position
complement(1248761..1251391)
Genome browser
AA seq
876 aa
AA seq
DB search
MNLVIVESPAKAKTINKYLGSGYEVLASYGHVRDLPSKDGSVLPDDDFSMHWEADAKGAK
RLSEIAEAAKRADRVILATDPDREGEAISWHVLEVLNKKKALKDTHVERVTFNAITKSAV
LEAMANPRQIDMELVEAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRIVVDR
EMEIEKFKAQEYWSIEADLNADSPPFTARLVKHAGKRVQRLDIKDEATAAAARAAIDAGD
FTINSVEKKPVRRNPAPPFTTSTLQQEASRKLGFSAQRTMQAAQKLYEGVDETGGLITYM
RTDGVQTTPEGIAQAREVIAKEFGPAFVPQEPRYYKTKAKNAQEAHEAIRPTNIARHPDS
LRLESDLQRLYELIWKRMVASQMEAARMDRTTVDIETPDGLTALRATGQVVTFDGFLAVY
EEGRDEKQKGAEEDEGDDTSRLPALKEGAKAKVDAIRTDQHFTEPPPRYSEATLVKKLEE
LGIGRPSTYASTLSTLRDREYVRVDKNRFYPEDKGRLVTAFLEQFFAKWVEYDFTAALET
RLDEVSAGQLDWKVLLREFWADFHAATQAAGELRTTAILDALNESLGAHIFPAKEDGSDP
RECPLCHQGQLSLKTSRFGAFIGCARYPDCKYTRPVASPSAEDGSAESGDRELGMDPETG
QPVQLKIGRFGPYVEITPPEGEKPKRSSLPKGWSPASLTLDQALRLLALPREVGVHPEDG
KMITAGLGRYGPFVLHAGTYANVSDIDEVFEVGLNRAVALLAEKRAGRPGRGAATAPLKD
LGAHPETGEPIHVMAGRFGPYVKSGKINATLPKGTAPEDLTLEDALPLLAAKAGAAPKKK
APAAKKAAAPKKAAAAKKPTAKKAPAKKSAKAKAED
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgttatcgtcgagagccccgcaaaggccaagaccatcaataaatacctcggc
tccggctatgaggttctggcgtcttacggccacgtccgcgacctgccatccaaggatggg
tcggtcctgcccgacgacgacttctccatgcactgggaggccgacgccaagggcgccaag
cggctgtccgaaatcgccgaggccgccaagcgcgccgaccgcgtcatcctggcgaccgac
cctgaccgcgaaggggaagccatcagctggcacgtgctggaagtgctgaacaagaagaag
gcgctgaaggacacgcacgtcgaacgcgtgaccttcaacgccatcaccaaatccgccgtg
ctggaagccatggccaatccgcgtcagatcgacatggagttggtcgaggcctatctggcc
cgccgcgccctcgactatctggtcggtttcaccctgtcgcccgtcctgtggcgcaagctg
ccgggcgcgcgctcggccggccgggttcaatccgtcgcgcttcgcatcgtcgtcgatcgc
gagatggagatcgagaagttcaaggcgcaggaatactggtccatcgaggccgacctgaac
gccgacagcccgcccttcaccgcccggctggtcaagcacgccggcaagcgggtccagcgt
ctggacatcaaggacgaggcgaccgccgccgctgcgcgtgcggccatcgacgccggcgac
ttcaccatcaactcggtcgagaagaagccggtgcgccgcaacccggccccgcccttcacc
acctcgaccctgcaacaggaagcctcgcgcaagctgggcttcagcgcccagcgcaccatg
caggcagcgcagaaactgtatgagggcgtggacgagaccggcggtctgatcacctatatg
cggaccgacggcgtccagaccacgcccgagggcatcgcccaggcgcgcgaggtcatcgcc
aaggaattcggcccggccttcgttccgcaggaaccgcgctattacaagaccaaggccaag
aatgctcaggaagcgcacgaagcgatccggccgaccaacatcgcccgccatcccgacagc
ctgcgcctcgaatccgatcttcagcgtctgtacgagctgatctggaagcggatggtcgcc
tcgcagatggaggcggcccgcatggaccgcaccacggtcgatatcgaaaccccggacggc
ctgacagccttacgcgccaccggccaggtggtgaccttcgacggcttcctggccgtctat
gaggaaggccgcgacgagaagcagaagggcgcggaagaggacgagggcgacgacaccagc
cgcctgcctgcgctgaaggaaggcgccaaggccaaggtcgacgccatccgcaccgaccag
catttcaccgaaccgcccccgcgctattcggaagccaccctggtcaagaagctggaagaa
ctgggcatcggccggccgtcgacctacgcctcgaccctgtcgaccctgcgcgaccgcgaa
tatgtgcgggtggacaagaaccgcttctatcccgaggacaaaggacggctggtcacggcc
ttcctggaacagttcttcgccaagtgggtcgaatacgatttcaccgccgcgctggagacc
cgtctggacgaggtgtcggccggtcaactggactggaaggtgctgctgcgcgagttctgg
gcagacttccacgccgcgacccaggccgccggcgaactgcgcaccacggccattctcgac
gccctgaacgagtccctgggcgcccatatcttcccggccaaggaagacgggtccgacccg
cgcgaatgcccgctatgccaccagggccagctcagcctgaagaccagccggttcggcgcc
ttcatcggctgcgcccgctatcccgactgcaaatatacccggcccgtcgccagcccgtcg
gctgaagacggttcggcggaaagcggcgaccgcgaactgggcatggatcccgagaccggc
cagccggtgcagttgaagatcggtcgtttcggcccctatgtcgaaatcacgccgcccgag
ggtgaaaagcccaaacgctcgtccctgcccaagggctggtcccccgcctcgctgacgctg
gaccaggctctgcgcctgctggccctgccgcgcgaggtcggggttcaccccgaggacggc
aagatgatcacggcgggcctgggccgttacggacccttcgtcctgcacgctggcacctat
gcgaacgtctcggacatcgacgaggtgttcgaggtcggcctgaaccgcgccgtcgccctg
ctggccgagaagcgcgccggccgtccgggtcgcggcgccgccacggccccgctgaaggac
ctgggcgcccacccggagacgggtgagccgatccacgtcatggccggacgcttcgggccc
tacgtcaagtcgggcaagatcaacgccaccctgcccaagggcacggcgcccgaagacctg
accctggaagacgccctgcccctgctggccgccaaggccggcgcggcgccgaagaagaag
gccccagcggccaagaaggcggctgcgcccaagaaggctgcggctgcgaagaagccgacg
gccaagaaggcgccggcgaagaagagcgccaaggcgaaggcggaagactga
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