Brevundimonas intermedia: ACETKC_09815
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Entry
ACETKC_09815 CDS
T10735
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bir Brevundimonas intermedia
Pathway
bir03030
DNA replication
bir03430
Mismatch repair
bir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACETKC_09815 (dnaE)
03430 Mismatch repair
ACETKC_09815 (dnaE)
03440 Homologous recombination
ACETKC_09815 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bir03032
]
ACETKC_09815 (dnaE)
03400 DNA repair and recombination proteins [BR:
bir03400
]
ACETKC_09815 (dnaE)
Enzymes [BR:
bir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACETKC_09815 (dnaE)
DNA replication proteins [BR:
bir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACETKC_09815 (dnaE)
DNA repair and recombination proteins [BR:
bir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACETKC_09815 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
RPAP3_C
Motif
Other DBs
NCBI-ProteinID:
XGI84985
LinkDB
All DBs
Position
complement(2025118..2028576)
Genome browser
AA seq
1152 aa
AA seq
DB search
MSAAEGQGFVHLRVRSAYSLLEGAIKAGKLGKLAADAGMPAVAIADRSNLFGALEFSQYT
KDAGVQPIVACALPVLGIGGQQAVRWAKTPTVVLLVQNETGWRNLCALSSSAYLDAGEMA
EPGVAWSLIEARSEGLILLSGGPDGPVDPLFVQGKTTEAAAALATMKSVFGDRFYVELQR
HGLDDERRAEPGLVEWAYANDTPLVATNDVYYAKAAQAKSHDALLCIADGAFTGQEDRRR
ITGEHWFKSAEAMRTLFADLPEACDNTIDIARRCAFLVKTHAPILPRFDTGAGRSEADEL
AHQAREGLKVRLSQITPAVPVEEYWTRLEWEVGIIQQMGFPGYFLIVSDFIKWAKEHGIP
VGPGRGSGAGSLVAWSLTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERREEVIDY
VQAHYGKDRVAQIITFGTLQARAVLRDVGRVLQMPLGQVDRLCKMVPNNPAAPVTLAQAI
DLEPRLKEARDAEPAVRTLLETALELEGLYRNASTHAAGIVIGDRPLVELVPLYQDPRST
IPASQFNMKWVEPAGLVKFDFLGLKTLTVLDRARGYLERRGAAPDWSGLPLDDARTYELM
ASGQTVGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPMEMIDTYIDRKFGRAEVD
YLHPSLKEVLTETYGVIIYQEQVMKIAQILAGYSLGEADLLRRAMGKKKKEEMDFQRARF
VKGALEKTVPETQSGSIFDLVAKFAGYGFNKSHAAAYALISFQTGWLKANHPVEFFAASM
SLDLSNTDKLAVFYQDAKRFDVPVLPPDINRSSADFDVAWDDSRGSVLYALGAIRNVGLE
AMRHVIEVRQTGGRFADIFDFLERVDPRSVNKRALEGLAKAGAFDSIHPNRRQLVEQADV
LMAYCQSVAAERASSQVSLFGGDQAHVGRPRLKSVDPWVGPERLDHELSAVGFYLSGHPL
DEMTSALKRKRVTFVAEAIPLAESGHEAFQMAGVVRRKQERASARTGEKFAFVTFSDPTG
EFECLFPPEQLRKCREVLEPGASVMVRVRAKASEGEVRFFGDDASRMDNLLDDANIGLRI
HVSARTADADALKARLERARSGAIGKGGEVSLIASLEGLQEVEVKLPGRYRLDGALRGAL
KSAPGVLMLEEA
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcggcagaaggtcagggtttcgtccatctgcgggtccgctcggcctattcgctg
ctggaaggcgcgatcaaggcgggcaagctgggcaagctggcggcggacgcgggcatgccg
gccgtggccatcgccgaccggtccaatctgttcggcgcgctcgagttcagccagtacacc
aaggacgcgggcgtccagccgatcgtcgcctgcgcgcttccggtcctgggcatcggcggc
cagcaggccgtccgctgggccaagaccccgaccgtggttctgctggtccagaacgagacg
ggctggcgaaacctgtgcgccctgtcgtcctcggcctatctggacgcgggtgaaatggcc
gagcccggcgtggcctggagcctgatcgaggcccgctccgaaggcctgatcctgctgtcg
ggcggccccgacggcccggtcgatcccctgttcgtccagggcaagacgacggaggcggcg
gccgctctggcgacgatgaaatccgtcttcggcgaccgcttctacgtcgagcttcagcgc
cacggtctggacgacgagcggcgggccgagcccggtctggtcgaatgggcctatgccaac
gacacgcccctggtcgccaccaatgacgtctattacgctaaggcggcccaggcgaagtcc
catgacgccctgctgtgcatcgccgacggcgccttcaccggccaggaagaccgccgccgc
atcaccggagaacactggttcaagtcggccgaggcgatgcggaccctgttcgccgacctg
cccgaggcctgcgacaacacgatcgacatcgcccggcgctgcgccttcctggtcaagacc
cacgcccccatcctgccgcgctttgacaccggggcggggcggtccgaggccgacgaactg
gcccaccaagcgcgcgaggggctgaaggtccgcctcagccagatcacccccgccgtgccg
gtcgaggaatactggacccggctggagtgggaggtcggcatcatccagcagatgggcttc
cccggctatttcctaatcgtgtcggacttcatcaaatgggccaaggagcacggcattccg
gtggggccggggcggggctccggggccggctcgctggtcgcctggtccctgaccatcacc
gatctggaccccttgcggttcggcctgctgttcgagcggttcctgaaccccgaacgggtc
tccatgcccgacttcgacatcgacttctgccaggagcggcgcgaagaggtgatcgactat
gtccaggcccactacggcaaggaccgggtcgcccagatcatcaccttcggcacgctgcag
gcgcgggccgtgctgcgcgacgtcggccgggtgctgcagatgccgctgggccaggtggac
cggctctgcaagatggtgccgaacaacccggccgcgcctgtcaccctggcccaggccatc
gacctcgagccgcgcctgaaggaggcgagggacgcagagccggcggtccgcaccctgctg
gaaaccgcgctggagctggaagggctgtatcgcaacgcctcgacccacgccgccggcatc
gtcatcggcgaccggcccctggtcgaacttgtgcccctgtaccaggatccgcgctccacc
attccggcgtcccagttcaacatgaaatgggtcgaaccggcgggtctggtgaagttcgac
ttcctgggcctgaagaccctgaccgtgctggaccgggcgcgcggctatctggagcggcgc
ggggccgcgccggactggagcggcctgccgctggacgacgcccgcacctatgagctgatg
gcctcgggccagaccgtcggggtgttccagctggaatcccagggcatgcgcgacaccctg
cgcaagatgcgctgcggctccatcgaggagatcaccgccctgatctcgctctatcggcca
gggccgatggagatgatcgacacctatatcgaccgcaaattcggccgggccgaggtcgac
tatctgcaccccagcctgaaagaggtgctgaccgagacctacggcgtcatcatctaccag
gaacaggtgatgaagatcgcccagatcctggcgggctacagcctgggcgaggccgacctg
ctgcgtcgggccatgggcaagaagaagaaggaggagatggacttccagcgggcgcgcttc
gtcaagggcgccctggagaagaccgtccctgagacccagtccggttcgatcttcgacctg
gtggccaagttcgccggctatggtttcaacaagtcgcacgccgccgcctatgccctgatc
tcgttccagacagggtggctgaaggccaatcacccggtcgaattcttcgcggcgtccatg
agcctggacctgtcgaacacagacaagctggcggtcttttatcaggacgccaaacggttc
gacgtgccggtgctgccgcccgacatcaaccgctcctcggccgacttcgacgtagcctgg
gacgatagccggggctcggtcctctatgccttgggcgccatccgcaacgtgggccttgag
gcgatgcgccacgtgatcgaggtgcgccagaccggcggtcggttcgccgacatcttcgac
ttcctcgagcgggtcgatccccgcagcgtcaacaagcgggcgctggaaggcctggccaag
gccggggccttcgacagcatccacccgaaccgccgccagctggtcgaacaggccgacgtc
ctgatggcctattgccagagcgtggcggccgagcgcgcctcgtcccaggtcagtctgttc
ggcggcgaccaggcccatgtggggcggccgcgtctgaaaagcgtcgatccctgggtcggg
ccggaacgtctggaccacgaactgtcggcggtcggcttctatctgtcgggccacccgctg
gacgagatgacctcggccctaaaacgcaagcgcgtcaccttcgtcgccgaggccattccc
ctggcggaatccggccacgaggccttccagatggccggggtggtgcgtcgcaaacaggaa
cgcgccagcgctcgcaccggcgagaagttcgccttcgtcaccttctcggatccgaccggc
gagttcgaatgcctgttcccgcccgaacagctgcgcaaatgccgtgaggtgctggagccg
ggcgcctcggtcatggtgcgggtccgcgccaaggcgtccgaaggcgaggtgcggttcttc
ggcgacgacgccagccggatggacaatctgctggacgacgccaacatcggcctgcgtatc
cacgtctcggcccgcaccgccgacgccgacgccctgaaggcccgtctggagcgggcgcgt
tcgggcgctatcggcaagggcggcgaggtgtcgctgatcgcctcgctggaggggcttcag
gaagtcgaggtcaaactgcccggccgttaccgcctcgacggcgccctgcgcggcgccctg
aagtcggcgccgggcgtgctgatgttggaggaggcttga
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