Brevundimonas intermedia: ACETKC_10720
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Entry
ACETKC_10720 CDS
T10735
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bir Brevundimonas intermedia
Pathway
bir03020
RNA polymerase
Brite
Enzymes [BR:
bir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACETKC_10720 (rpoC)
Transcription machinery [BR:
bir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACETKC_10720 (rpoC)
DNA repair and recombination proteins [BR:
bir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACETKC_10720 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XGI85160
LinkDB
All DBs
Position
complement(2184511..2188707)
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEVLNIFNPVPVTPTFDQIKIALASPEKIRSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPTKDYECLCGKYKRMKYKGIICEKCGVEVTLARVRRERMGHIDLAAPVAHIWFLKS
LPSRISLMLDMALKDVERVLYFENYIVTEPGLTPLKQNQLLTEDEFYRYQEEYGDDGFTA
EIGAEAVRNLLMGIDLHAEAEKHRGELADSPSEMKAKKASKRLKLIEAFLESGNKPEWMI
LTIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVITVG
PELKLHECGLPKKMALELFKPFIYARLDAKGLSGTVKQSKRMVEREQPAVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPKLIEGKAIRLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLVKDGEPGEGKLFANIGEIDAALD
AKVVTLHSRIKARWTEQDAEGKEVTKVIDTTPGRMKLAALLPRNPNVGYRLLEKNLTKKE
IGNLIDVVYRHCGQKATVIFADQMMGLGFREAAKAGISFGKDDIVIPAKKAELVAETRTQ
VEEYEQQYADGLITRGEKYNKVVDAWAKATDRIADAMMGEIAQPRVLIEGENPDINSVFM
MANSGARGSQAQMKQLGGMRGLMAKPSGEIIETPITSNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDSIVTEQDCGSTRGITLRAVMEGGDVLVSLGARILGRYA
AEDIKEPGTDTVLFPADTYLVEEVVEAVDAAGVQSVKVRSALTCEAEAGICAHCYGRDLA
RGTNVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVAETSFMEATNAGVAKITGPTV
TAAHGDLVAMSRNVIVTVVVDGKDRETHKAPYGARIRVKEGGEVKKGQRLAEWDPYTTPI
LTEVGGLIRFEDLVEGLSVKEETDEATGIAQRVVSDWRASPRGSDLRPAMGVTLGDAYAK
LASGSDARYLLPVGAVLSVSNGDEVKPGEIIARVPTEGAKTRDITGGLPRVAELFEARRP
KDCAVIAEMDGRVEFGRDYKNKRRIKITPEVNADGVQGEPVEFLIPKGKHISVHDGDLIQ
KGDYIIDGNPDPHDLLRIQGVEALAEYLVNEVQEVYRLQGVPINDKHIEVIVRQMLQKVE
VLDSGETTLIRGDTVEVAEAVLENQKVEKRGGRLATTQPVLLGITKASLQTRSFISAASF
QETTRVLTDASVHGKKDMLEGLKENVIVGRLIPAGTGAYLRALQKIANDRDAELTQARED
AIEPLPADLQLELESSEG
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaagtcctgaacatcttcaacccggtcccggtcaccccgaccttcgaccag
atcaagatcgccctggcctcgccggagaagatccggtcgtggtcgttcggtgagatcaag
aagccggaaaccatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgcgcc
cgtatctttggcccgaccaaggactacgaatgcctgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgagaagtgcggcgttgaagtcacgctggcccgcgttcgccgc
gagcgtatgggtcacatcgacctggccgccccggtcgcccacatctggttcctgaagtcg
ctgccgtcgcgcatctcgctgatgctggacatggcgctgaaggacgttgagcgcgtcctg
tatttcgagaactatatcgtcaccgagccgggcctgaccccgctgaagcagaaccaactg
ctgacggaagacgagttctatcgttaccaggaagaatacggcgatgacggcttcaccgcc
gagatcggcgccgaggccgtccgcaatctgctgatgggcatcgacctgcacgccgaggct
gaaaagcaccgcggtgagctggccgacagtccgtcggaaatgaaggccaagaaggcgtct
aagcgcctgaagctgatcgaggccttcctggaatcgggcaacaagcccgagtggatgatc
ctgaccatcgtgccggtcatcccgccggaactgcgtccgctggtgccgctggacggcggt
cgtttcgcgacctccgacctgaacgacctgtatcgccgcgtcatcaaccggaacaaccgc
ctgaagcgcctgatggagctgcgggcgccggacatcatcatccgtaacgaaaagcggatg
ctgcaagagtccgtcgatgcgctgttcgacaacggccgtcgtggccgcgtgatcacgggc
gccaacaagcgtccgctgaagtcgctggccgacatgctgaagggcaagcaaggccgcttc
cgtcagaacctgctgggcaagcgcgtcgactattcgggccgttcggtcatcaccgtgggt
ccggaactgaagctgcacgagtgcggcttgcccaagaagatggcgctggagctgttcaag
cccttcatctatgcgcgcctggacgccaagggcctgtcgggcaccgtcaagcaatccaag
cgcatggtcgagcgcgagcaacccgccgtctgggacatcctggacgaagtcatccgcgag
cacccggttctgctgaaccgcgcgccgacgcttcaccgtctgggcatccaggcgttcgaa
cccaagctgatcgagggcaaggccatccgcctgcacccgctggtctgtacggcgttcaac
gccgacttcgacggcgaccagatggccgtgcacgtcccgctgagccttgaggcccagctg
gaagcgcgcgtgctgatgatgtcgacgaacaacatcctgtcgcccgccaacggcaagccg
atcatcgtgccgtcgcaggacatcgtcctgggtctgtactatctgtcgctggtcaaggac
ggcgagccgggtgaaggcaagctgttcgccaatatcggcgagatcgacgccgccctggac
gccaaggtcgtcaccctgcacagccgcatcaaggcgcgctggacggaacaggacgccgaa
ggcaaggaggtgaccaaggtcatcgacaccacgccgggccggatgaagctggcggctctg
ctgccgcgcaacccgaacgtcggctatcgtctgctcgagaagaacctgaccaagaaggaa
atcggcaatctgatcgacgtggtctatcgccactgcggtcagaaggcgacggtcatcttc
gccgaccagatgatgggcctgggcttccgcgaggccgccaaggcgggcatctcgttcggc
aaggacgacatcgtcattccggcgaagaaggccgagctggtcgcagaaacccgcacccag
gtggaggagtacgagcaacagtacgccgacggcctgatcacgcgcggcgagaagtacaac
aaggtcgtcgatgcttgggccaaggccacggaccggatcgccgacgccatgatgggcgag
atcgcgcagccgcgcgtgctgatcgagggtgaaaatcccgacatcaactcggtcttcatg
atggccaactccggcgcccggggttcgcaggcgcagatgaagcaactgggcggcatgcgc
ggcctgatggccaagccgtccggcgagatcatcgagacgccgatcacctcgaacttcaag
gaaggcctgaccgtccttgaatacttcaactccacccacggcgcccgtaagggtctggcc
gacaccgcgctgaagaccgccaactcgggttatctgacccgccgtctggtggacgtggcg
caggactccatcgtcaccgaacaggactgcggctcgacgcgcggcatcactctgcgtgcg
gtcatggaaggcggcgacgtcctggtctcgctgggcgcccgtatcctgggtcgctatgcg
gccgaggacatcaaggagccgggcacggacaccgtcctgttccccgccgacacctatctg
gtggaagaagtggtcgaggctgtcgacgccgccggcgttcagtcggtcaaggtccgttcg
gccctgacctgcgaggctgaagccggtatttgcgcccactgctacgggcgtgacctggcg
cgcggcaccaacgtcaacatcggtgaagcggtcggcgtcatcgccgcccagtcgatcggc
gagccgggcacccagctgacgatgcggaccttccacatcggcggtacggcccaggtggcg
gaaacctccttcatggaggcgaccaacgcgggtgtggccaagatcaccggcccgaccgtt
accgccgcccacggcgacctggtggcgatgagccgcaacgtcatcgtgaccgtggtcgtg
gacggcaaggatcgcgaaacccacaaggccccctacggcgcccggatccgggtcaaggag
ggcggcgaggtcaaaaagggccaacgtctggcggagtgggacccctacaccaccccgatc
ctgacggaagtcggcggtctgatccgcttcgaggacctggtcgaaggcctttcggtcaag
gaagaaaccgacgaagcgacgggcatcgcccagcgcgtcgtcagcgactggcgcgccagc
ccgcggggttcggatctgcgtccggccatgggcgtcaccctgggcgacgcctacgccaag
ctggcctcgggctctgacgcccgttacctgctacccgtgggcgcggttctgtccgtgtcg
aacggcgacgaggtcaagccgggcgagatcatcgcccgcgtgccgaccgaaggcgccaag
acccgcgacattaccggcggtctgccgcgcgtcgccgaactgttcgaagcgcgtcgtccc
aaggactgcgcggtcatcgccgagatggatggtcgcgtcgaattcggtcgcgactacaag
aacaagcgtcgcatcaagatcacgccggaagtcaacgccgacggcgtgcagggcgaaccg
gtcgagttcctgatcccgaagggcaagcacatctccgtccacgacggcgatctgatccag
aagggcgactacatcatcgacggcaacccggatccgcacgatctgctgcgcatccagggc
gtcgaggcgctggccgagtatctggtgaacgaagtgcaggaggtctaccgactgcaaggc
gtgccgatcaacgacaagcacatcgaagtcatcgtgcgtcagatgctgcagaaggtcgaa
gtcctggattcgggtgaaaccaccctgatccgcggcgacaccgtcgaagtggccgaagcc
gttctggaaaaccagaaggtcgagaagcgcggcggccggctggccaccacccagcccgtc
ctgctgggcatcaccaaggcgtcgctgcaaacccgcagcttcatctcggcggcgtccttc
caggagaccacccgcgtcctcaccgacgcctcggtccacggcaagaaggacatgctggaa
ggcctgaaggaaaacgtcatcgtcggccgtctgatcccggccggtacgggcgcctatctg
cgggccctgcaaaagatcgccaacgatcgcgatgcagagctgacgcaagcccgcgaagac
gcgatcgagccgttgccggccgatctgcaactggagctggagagcagcgaaggctga
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integrated database retrieval system
