Brevundimonas intermedia: ACETKC_12625
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Entry
ACETKC_12625 CDS
T10735
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bir Brevundimonas intermedia
Pathway
bir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACETKC_12625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bir03019
]
ACETKC_12625
Enzymes [BR:
bir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ACETKC_12625
Messenger RNA biogenesis [BR:
bir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACETKC_12625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
XGI85528
LinkDB
All DBs
Position
complement(2559400..2560608)
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AA seq
402 aa
AA seq
DB search
MSVSMLGQPWLEASATRAVMAALEAAGGPDCARFVGGCVRNSLLGRPVDDIDIATRLRPE
ETVAALKAAGLKAVPTGIEHGTITGVSERKPYEITTLRRDVETDGRRAVVAFTEDWAEDA
ARRDFRLNALYADAAGRVFDPTGGGLADAAEGRIVFVGEAETRIREDYLRILRFFRFQAW
YGRGEPDPTGLAACAALKDGMARLSAERVSKELLKLLAAVDPRPSVRAMAETGVLAVVLP
DVQPLDLFEATCGLTDDPVMRLSALLPDDAAVVVRIAQDLRLSNAVRDRMAAAVAEGPVV
TPDMTGAATRAAIYRLGRAAFEDRLTRAEAMSGRDGAALRRLATAWTPPSMPVGGRDLAR
LGRTPGPETGRILKAFEDGWIADDFPTDGHEDRLKSLMASLG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtgtccatgctcggtcagccgtggctggaggcctcagccacccgcgccgtcatg
gcggctctggaagcggcgggcggccccgactgcgcccggttcgtcggcggctgcgtccgt
aacagtctgctgggccggcccgtggatgatatcgacatcgccacgcggctgcggccggaa
gagacggttgcagcgctgaaggcggcggggctgaaggccgtgccgactgggatcgagcac
ggcacgatcaccggggtgtccgagcgcaaaccctatgagatcacgaccctgcggcgggat
gtggagaccgacgggcgacgcgcggtggtcgccttcaccgaggactgggccgaggatgcg
gcgcgacgggacttccgcctgaacgccctctacgccgacgcggccgggcgggtgttcgat
cccaccggcggcggtctggcggacgcggccgagggccggatcgtcttcgtcggcgaggcc
gaaacgcggatccgcgaagattatctgcggatcctgcgcttcttccgcttccaggcctgg
tacgggcgcggcgaacccgatccgaccggtctggccgcctgcgccgcgctgaaggacggg
atggcccggctgtcggcagagcgggtgtccaaggaactgctgaagctgctggcggcggtc
gatccccgcccttcggtgcgcgccatggcggagaccggggtgctcgccgtcgtcttgccg
gacgtccagccgctggatctgttcgaggccacgtgtgggctgaccgatgatccggtgatg
cgtctgtcggccctgctgcccgacgatgcggccgtggtcgtgcggattgcccaggatctg
cgactgtcgaacgcggtgcgagatcggatggcggcggccgtcgccgaaggtccggttgtg
acgcccgacatgactggcgcggcgacgcgggcggcgatctatcggctggggcgcgccgcc
tttgaggatcggttgacgcgcgcggaggcgatgagcggtcgcgacggcgcggccttgcgc
cgccttgcgaccgcctggacgccgccgtccatgccggtcggcggacgggacctggcccga
ctgggccggacgccgggacccgagaccgggcgtatcctgaaagcttttgaggacggctgg
atcgcggacgacttccccaccgacggccatgaagaccggctgaaatcgcttatggcttcg
ctcgggtga
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