Brevundimonas intermedia: ACETKC_14070
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Entry
ACETKC_14070 CDS
T10735
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bir Brevundimonas intermedia
Pathway
bir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACETKC_14070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bir03019
]
ACETKC_14070
Enzymes [BR:
bir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACETKC_14070
Messenger RNA biogenesis [BR:
bir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACETKC_14070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
XGI85797
LinkDB
All DBs
Position
2851846..2853378
Genome browser
AA seq
510 aa
AA seq
DB search
MAESALPHAKDTAVSTTFESMGLNKALLQALASEGYTKPTPIQEKAIPDVMQGKDLLGIA
QTGTGKTAAFALPILHRLAENRIAPKPRTTRVLVLSPTRELATQIGDSFKAYGAHLGFRV
AVIFGGVKYGGQERALQQGLDILVAAPGRLLDHIQQKNLDLSSTEIFVLDEADQMLDLGF
IKPIRQIVSKIPAKRQNLFFSATMPSEIGKLAGELLKDPVKVQVTPQSTTVQRISQSVVY
IEQGRKRALLTEMFSDPEYTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRER
TLAAFKAGKLRVLVATDIAARGIDVDGVSHVVNFELPHVPESYVHRIGRTARAGKDGTAV
SFVAGDEMKLLKDIEKVTRQKIPAIDRRNDKALGQLDATIMATGVGKKATMPEREGGDRN
EGGRGGRGRSRVPHRDGVRPEGGGQPHRQRRARPGEAPAAPRPERAYNPLAGERVPSIND
NAKPAEGEMKRRPRRRPSNGGKGYGGAAKG
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaagcgctctgccgcacgcgaaagacactgctgtgagcaccacattcgaatcc
atgggcctgaacaaggcccttcttcaggcgctggcgtcggaaggctacaccaagccgacc
ccgatccaggaaaaggccatccccgacgttatgcagggcaaggacctgctgggcatcgcc
caaaccggcaccggcaagaccgccgccttcgccctgccgatcctgcatcgcctggcggag
aaccgcatcgcccccaagccgcgcacgacgcgtgtgctggtcctgtcgcccacgcgtgag
ctggcgacccagatcggcgacagcttcaaggcttacggcgcccacctgggcttccgggtc
gccgtgatttttggcggcgtgaaatacggcggccaggagcgggcgctgcaacagggtctg
gacatcctggtcgccgcgcctggccgcctgctggaccacatccagcaaaagaacctcgac
ctgtcctcgaccgaaatcttcgtgcttgacgaggccgaccagatgctggacctgggcttc
atcaagccgatccgccagatcgtctccaagatccctgccaagcgccagaacctgttcttc
tcggcgactatgccgagcgagatcggcaagctggcgggcgagctgctgaaggatccggtc
aaggtccaagtgaccccgcaatcgaccaccgtgcagcgcatcagccagtcggtcgtctat
atcgaacagggcaggaagcgcgccttgctgaccgaaatgttcagcgatcccgagtacacg
cgctgcctggtcttcaccaagaccaagcacggcgccgacaaggttgcggcctatctggaa
gccggtggcgtcgaggccggcgccatccacggcaacaagagccagccccagcgtgaacgc
accctggccgcgttcaaggccggcaagctgcgcgtcctggtcgccaccgacatcgccgcg
cgcggcatcgatgtggacggcgtctcgcacgtcgtgaacttcgagctgccccatgtgccg
gaaagctatgttcaccgcatcggccgcaccgcacgggcgggcaaggacggcaccgccgtc
agcttcgtcgccggcgacgagatgaaactgctgaaggatatcgaaaaggtcacgcgccag
aagatcccggccatcgaccgccgcaacgacaaggccctgggccagctggacgccaccatc
atggcgaccggcgtcggcaagaaggcgaccatgccggaacgcgaaggcggcgaccgcaat
gaaggcggccgtggtggtcgtggacgcagccgcgtcccgcatcgcgatggcgtgcgcccg
gaaggcggcggccagccgcatcgccagcgccgcgcccgtcccggcgaggcgcctgcggct
ccgcgtcctgaacgcgcttacaaccccctagccggtgagcgcgtgccttcgatcaacgac
aacgcgaagcctgcggaaggggaaatgaagcgccgtccccgccgtcgcccgtcgaacggc
ggcaagggctacggcggcgccgcaaagggctga
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