Brevundimonas intermedia: ACETKC_14715
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Entry
ACETKC_14715 CDS
T10735
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bir Brevundimonas intermedia
Pathway
bir03018
RNA degradation
Brite
Enzymes [BR:
bir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACETKC_14715
Messenger RNA biogenesis [BR:
bir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACETKC_14715
Ribosome biogenesis [BR:
bir03009
]
Prokaryotic type
rRNA helicases
ACETKC_14715
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XGI85924
LinkDB
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Position
complement(3009277..3011181)
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AA seq
634 aa
AA seq
DB search
MPFPAVHPALDRALINKGYAEPTPVQAAVLEGEHADRDLLVSAQTGSGKTVAFGLAAAPT
LLGDKPIFGPGGAPLCLAIAPTRELAMQVAAELQWLYADSGAKIATCVGGMDARREARAL
GFGVHIVVGTPGRLKDHIDRGNLDLSELKVAVLDEADEMLDMGFREDLEFILDHAPAERR
TLLFSATIAREIATLAKRYQKDAVRIDATDKTRQHADIEYRAYRIAPNEIEHAVVNTLRW
YEMPRAMVFCSTRDSVRHLQASLLERGFSTVSLSGEMGQRERTDALQALRDGRARVCVAT
DVAARGLDLPDLGLVIHAELPMNRAGLLHRSGRTGRAGKKGVSVMLVPHSRRRKAERLMD
DAGIDAVWSGAPTFDEIRKADEGRLLSPEFFEADVSDEDMIVAKRMIAERTPDEIAAALV
RLLRKEQPAPEELSDPGSDRSPVKRERTVRNEDGTAAQPWPGDRLGADDVVWFRLDVGRN
KNADPKWLIPLICRIGGISKPQIGAIRTFPEETRFEIAKTHEKAFREAVAASNDEVKITS
SEAPTPGSMKAGRFSGKPNRDEGDRPFKKTPYKRADGGEGDARPPFKKKPWAPKSDGGGA
NPRSNAAADKPFAKKPFKAKPGFKKEGFKGKPKG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgccctttcccgccgtccatcccgcgctcgaccgcgcactgatcaacaagggctatgcc
gagccgaccccggtccaggccgccgtcctggaaggcgagcatgcggaccgcgacctgctg
gtgtcggcccagaccggatcgggcaagacggtcgctttcggcctggccgccgcgccgacc
ctgttgggcgacaagccgatcttcggtccgggcggcgcccccctgtgcctggccatcgcg
ccgacgcgggaactggctatgcaggtcgcggccgagctccagtggctgtacgccgactcc
ggcgccaagatcgccacctgcgtcggcggcatggatgcacgacgtgaagcgcgcgccttg
ggcttcggcgtccatatcgtcgtcggcacgccgggccgtctgaaggaccatatcgaccgg
ggcaatctggacctgtccgagctgaaggtcgccgtcctggacgaggccgacgagatgctg
gacatgggcttccgcgaggacctggagttcatcctggaccatgcgccggccgaacgccgc
accctgctgttctcggccaccatcgcgcgcgagatcgcgaccctggccaagcgctaccag
aaggacgcggtgcgcatcgacgccaccgacaagacgcgccagcacgccgacatcgaatac
cgcgcctatcgcatcgccccgaacgagatcgagcacgcggtggtcaacaccctgcgctgg
tatgagatgccgcgcgccatggtcttctgctcgacgcgcgattccgtccgtcacctccag
gcctcgctgctggagcgcggcttctcgaccgtgtccctgtcgggcgagatgggtcagcgc
gaacgcaccgacgccctgcaggcgctgcgtgacggccgcgcccgcgtctgcgtcgccacc
gacgtggccgcgcgcggtctggacctgccggacctgggcctggtcatccacgccgaactg
ccgatgaaccgcgccggcctgctgcaccgttcgggccggactggccgggcgggcaagaag
ggcgtgtccgtgatgctggtgccgcactcgcgtcgccgtaaggccgagcgtctgatggac
gacgccggcatcgacgccgtctggtccggcgccccgaccttcgacgagatacgcaaggcc
gatgaaggccgtctgttgtcgcccgagttcttcgaggccgacgtgtccgacgaggacatg
atcgtagccaagcggatgatcgccgagcgcacgcccgacgagatcgccgccgccctggtg
cgtctgctgcgcaaggagcagccggcgccggaagaactgtccgatccgggctcggatcgc
agccccgtcaagcgcgagcgcaccgtgcgcaacgaagacggcacggccgcccaaccctgg
ccgggcgaccgcctgggcgcggacgacgtggtctggttccgcctggacgtgggccgaaac
aagaacgccgatcccaaatggttgatcccgctgatctgccgcatcggcggcatctccaag
ccccagatcggcgccatccgcaccttcccggaagagacccggttcgagatcgccaagacc
cacgaaaaggccttccgcgaggccgtcgccgcctcgaacgacgaggtcaagatcacgtcg
tcggaagctccgacgccgggctcgatgaaggccggccgcttctccggcaagccgaaccgc
gacgaaggcgatcgtccgttcaagaagaccccctacaagcgcgccgacggcggcgagggc
gacgcccgcccgccgttcaagaagaagccctgggcgccgaagtccgatggcggcggcgcc
aacccgcgctccaacgcggccgccgacaagccgttcgccaagaagccgttcaaggccaag
ccgggcttcaagaaggaaggcttcaagggcaagcccaagggctga
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