Brevundimonas intermedia: ACETKC_16650
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Entry
ACETKC_16650 CDS
T10735
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bir Brevundimonas intermedia
Brite
KEGG Orthology (KO) [BR:
bir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bir03016
]
ACETKC_16650 (truB)
Enzymes [BR:
bir01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACETKC_16650 (truB)
Transfer RNA biogenesis [BR:
bir03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACETKC_16650 (truB)
Prokaryotic type
ACETKC_16650 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
XGI86283
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All DBs
Position
3406289..3407218
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AA seq
309 aa
AA seq
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MARKKKGDVVDGWVCLDKPFEMGSTEAVSRIRRLFNAQKAGHAGTLDPLASGILPIALGE
ATKTVPMMMEAQKVYRFTINWGVSTDSVDREGEIIGRSDVRPSVDQVRAALPAFVGEIDQ
TPPRFSAIKVDGARAYDLARDGVEFELQARRVTIHSAEVTDVPDADHLELTIRTGKGVYV
RSLARDLAALLGAEGHVSALRRERVGPFHTENAVTLDFLEDLVHRGAASEGLLPVATALD
DIPELAVTDQDAFSLRQGRPIVLLPRQVETLKDRLSGGSRTVSAFQGQTLVALCQLRAGR
LEPDRVFNL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaagaagaagggcgacgtcgtcgacgggtgggtctgcctagacaagccgttt
gagatgggatcgaccgaggcggtcagccgcatccgccgcctgttcaacgcccagaaggcc
ggtcacgccgggacgctggatccgttggccagcggcatcctgcccattgcgctcggcgag
gcgaccaagacggtgccgatgatgatggaggcgcagaaggtctatcgcttcaccatcaac
tggggcgtctcgacagacagcgtggaccgcgagggcgagatcatcggccgctcggacgtg
cggccttcggtggatcaggtgagggccgcccttcccgccttcgtcggagagatcgaccag
accccgccccgattctcggccatcaaggtggacggcgcccgcgcctatgacctagcccgc
gacggagtcgagttcgagcttcaggcccgccgcgtcaccatccattcggccgaggtcacg
gacgtcccggacgccgatcacctcgaactgaccatccgcaccggcaagggcgtctatgtc
cgctcgctggcgcgcgacctggcggccctcctgggcgccgaggggcatgtttcggccctg
cggcgcgagcgggtgggaccgtttcataccgaaaacgccgtgacgctggattttctcgag
gatttggtgcataggggcgccgcctcggaaggcttgcttcccgttgcgaccgccctggac
gacatcccggagctggccgtgacggaccaggacgccttctcgcttcggcagggacgcccg
atcgttctgctcccccgtcaggtggaaaccctcaaggatcgcctttccggcggttcgcga
acggtttcagcctttcagggccagaccctcgtcgccctctgtcagttgcgggccggccgg
ttagaacccgaccgcgttttcaacctctag
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