Brevundimonas intermedia: ACETKC_16660
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Entry
ACETKC_16660 CDS
T10735
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bir Brevundimonas intermedia
Pathway
bir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACETKC_16660 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bir03019
]
ACETKC_16660 (pnp)
03016 Transfer RNA biogenesis [BR:
bir03016
]
ACETKC_16660 (pnp)
Enzymes [BR:
bir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACETKC_16660 (pnp)
Messenger RNA biogenesis [BR:
bir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACETKC_16660 (pnp)
Transfer RNA biogenesis [BR:
bir03016
]
Prokaryotic type
tRNA degradation factors
ACETKC_16660 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
XGI86285
LinkDB
All DBs
Position
3407818..3410055
Genome browser
AA seq
745 aa
AA seq
DB search
MFDIKRKTIEWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRSPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNETQVVITVLQH
DMENDPDVLGMVAASAALTISGVPFMGPIGAARVGLIDGELVLNPTVDQIPGSDLDLVVA
GTQDALMMVESEAKELSEEKMLEALMFAHAGMQPVIDAIIDLAEHAAKEPFDFQAEDHSD
VVASIKKLVGEDIKSAYTHPGKYERRSGVDAAKKTAAAALVKTDENPEGVDSSKFSAAFK
ECEADVLRRDIIENAHRVDGRALDKVRAIVSEVGVLPRTHGSALFTRGETQALVVATLGT
GEDEQYIDSLQGTYKESFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIRPMLPSK
EDFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLIRPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTSEGITSLQMDIKVAGITKEIMKQALTQASAGRLHILDEM
SKAMDAPRAELGEHAPKIETIKIAVDKIREVIGSGGKVIREIVEKTGAKIDIGDDGTIKV
AANDQEKIDAAKAWIQSIASEPEVGTIYSGKVVKVVDFGAFVNFFGAKDGLVHVSQIALE
RVANPADVLSEGQEVKVKFLGFDDRGKTKLSMKVVDQSTGEDLTDKINAERAERGEEPLS
EDTGGRPKREGGGDRGGDRGRRRRD
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaaacgcaagacgatcgagtgggccggacgcccgctgaccctggaaacg
ggccgcatcgcccgccaagccgacggcgccgtgctggcgacctatggcgagaccgtggtt
ctggccaccgtcgtctacggccgttcgcccaagccgggcctggatttcttccccctgacc
gtcaactaccaggaaaagaccttcgccgctggcaagatccctggcggctacttcaagcgt
gaaggccgtcccagcgagaaggaaaccctggtttcccgcctgatcgaccgtccgatccgc
cccctgttcgtcaagggcttcaagaacgagactcaggtcgtcatcaccgtgctgcagcac
gacatggaaaacgatccggacgtcctgggcatggtcgccgcctcggccgccctgaccatc
tcaggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggcctgatcgacggcgaa
ctggttctgaacccgaccgtcgaccagatcccgggctctgacctggacctggtggtcgct
ggcacgcaagacgccctgatgatggtcgaatccgaagccaaggagctgtcggaagagaag
atgctcgaggcgctgatgttcgcccacgccggcatgcagccggtgatcgacgccatcatc
gatctggccgaacacgccgccaaggagccgttcgacttccaggccgaagaccactccgac
gtcgtcgcctcgatcaagaagctggtcggcgaagatatcaagtccgcctacacccacccc
ggcaagtacgagcgtcgctcgggcgtcgatgcggccaagaagaccgccgccgccgccctg
gtgaagaccgacgagaaccccgagggcgtcgacagctccaagttctcggccgccttcaag
gaatgcgaagccgacgtcctgcgtcgcgacatcatcgagaacgcccaccgcgtcgacggc
cgcgccctggacaaggtccgcgccatcgtgtcggaagtcggcgtcctgccgcgcacccac
ggttcggccctgttcacgcgtggggaaacccaggccctggtcgtcgccaccctgggcacc
ggcgaagacgagcagtacatcgacagcctgcagggcacctacaaggaaagcttcctgctg
cactacaacttccccccctattcggtgggtgaagcaggccgcatgggctcgcccggccgt
cgcgaaatcggtcacggcaagctggcctggcgcgcgatccgtccgatgctaccgtcgaag
gaagacttcccctacaccatccgcctggtctccgagatcaccgagtcgaacggctcgtcc
tcgatggccacggtctgcggttcgtcgctggccctgatggacgccggcgtgccgctgatc
cgtccggtctcgggcatcgccatgggcctgatcctggagccgtccggcgagttcgccatc
ctgtcggacatcctgggtgacgaagaccatctgggcgacatggacttcaaggtcgccggc
acgtcggaaggcatcaccagccttcagatggacatcaaggtcgccggcatcaccaaggag
atcatgaaacaggctctgacccaggcctcggccggccgcctccacatcctggacgagatg
tccaaggccatggatgcgccgcgcgccgaactgggcgagcatgcgccgaagatcgaaacc
atcaagatcgcggtcgacaagatccgtgaagtgatcggttcgggcggcaaggtcatccgc
gagatcgtcgaaaagaccggcgccaagatcgacatcggcgacgacggcaccatcaaggtc
gccgccaacgaccaggaaaagatcgacgccgccaaggcctggatccagtccatcgcctcg
gagccggaagtcggaaccatctactccggcaaggtcgtgaaggtcgtcgacttcggcgcc
ttcgtgaacttcttcggcgccaaggacggcctggtccacgtgtcccagatcgccctggaa
cgcgtcgccaacccggccgacgtcctgtcggaaggccaagaagtgaaggtcaagttcctg
ggcttcgacgatcgcggcaagaccaagctgtcgatgaaggtcgtcgatcagtcgacgggt
gaagacctgaccgacaagatcaacgccgagcgcgctgagcgcggcgaagagcccctgtcg
gaagacaccggcggtcgtcccaagcgcgaaggcggcggtgatcgcggtggcgaccgcggc
cgtcgtcgtcgcgactaa
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