Bacteroides intestinalis: DXK01_000805
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Entry
DXK01_000805 CDS
T06090
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bis
Bacteroides intestinalis
Pathway
bis03410
Base excision repair
bis03430
Mismatch repair
bis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DXK01_000805 (recJ)
03430 Mismatch repair
DXK01_000805 (recJ)
03440 Homologous recombination
DXK01_000805 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bis03400
]
DXK01_000805 (recJ)
DNA repair and recombination proteins [BR:
bis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DXK01_000805 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DXK01_000805 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DXK01_000805 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QDO67559
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All DBs
Position
242294..244009
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AA seq
571 aa
AA seq
DB search
MTHKWNYQPITPEQVETSQKLAQELGISPILSGLLVQRGITKAQDAKKFFRPQLPDLHDP
FLMKDMDVAVERLNKAMGKKERILIYGDYDVDGTTAVALVYKFIQQFYSNIDYYIPDRYN
EGYGVSTKGVDYAAETGVGLIIVLDCGIKAVEEITYAKEKGIDFIICDHHVPDDVLPPAA
AILNAKRLDNTYPYEHLSGCGVGFKFMQAFAISNGIEFHHLIPLLDLVAVSIASDIVPIM
GENRILAFHGLKQLNSNPSVGLKAIIDVCGLTEKDITVSDIVFKIGPRINASGRIQNGKE
AVDLLTEKDFSMALEKANQINQYNETRKDLDKTMTEEANQIVADLEGLADRRSIVLYNED
WHKGVIGIVASRLTEIYYRPAVVLTRTDDMATGSARSVSGFDVYKAIEYCRDLLENFGGH
TYAAGLSMKVENVPAFTERFEEFVSQNILPEQTSAVINIDAEIDFRDISPKFFNDLKKFN
PYGPDNPKPIFCTHNVYDYGTSKVVGRDQEHIKLELVDNKSNNVMNGIAFGQSSHVRFIK
TKRSFDICYTIEENTHKRGEVQLQIEDIQPN
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgactcacaaatggaattatcaacccattacacccgaacaggtagagacaagccaaaag
ttggcccaagaattagggattagcccgattcttagcggattattggtgcagcggggaata
acgaaggcacaggatgccaagaagtttttccgcccgcaattgcccgacttgcacgaccca
ttcctgatgaaagacatggatgtggccgtggaacgccttaataaggcaatgggaaagaaa
gagcgtattctgatttatggtgactatgatgtagacggtactactgcagtggcattggtc
tacaagtttattcaacagttctattcgaacattgactattacatccccgaccgctacaac
gaaggctacggggtatctaccaaaggggtagactatgccgcggaaaccggtgtaggattg
attatcgtactggattgcggcatcaaagctgtagaggagatcacctatgccaaagaaaaa
ggcattgacttcatcatctgcgaccatcatgtgcccgacgatgtacttccacctgccgcc
gccatcctgaacgccaagcgtttagataatacgtatccttacgagcacctttccggttgc
ggcgtaggctttaaatttatgcaggcatttgccatcagcaatggcattgagttccatcac
ctcattccactgctcgacttggttgccgtaagcatcgcctcggacattgttcccatcatg
ggagaaaaccggatacttgctttccatggattgaagcaattgaacagtaatcccagtgta
ggcttgaaagcgatcatcgacgtatgcggactgacggaaaaggatattaccgtcagcgac
atcgtgttcaagataggcccacgcatcaatgcctccggacgtatccaaaacggaaaagaa
gctgtcgacctgctgacagagaaagatttctccatggctttggaaaaagccaatcaaatc
aatcaatacaatgaaacccggaaagacctcgataagaccatgaccgaggaagccaaccag
attgtagctgacctggaaggactggcagaccgccgctccatcgtgttatacaacgaggat
tggcacaaaggtgttatcggtatcgttgcctcccgcctgacggagatttattatcgcccc
gcggtagtactgacccgtacggatgatatggcaacaggttccgcccgttccgtatctggt
tttgacgtgtataaggcgattgaatattgtcgtgatctgctggaaaatttcggtggccat
acctatgcagccggtctttcgatgaaagtggagaatgttcccgcctttaccgaacgcttc
gaggaattcgtttcacagaacatcctaccggaacagacaagtgcggtcataaatatcgat
gcagagatagatttcagggatatttctccgaaattctttaatgacctgaagaaattcaat
ccttatggtccggataatccgaaaccgatattctgtacgcataatgtctatgattacggt
accagtaaagtagtggggcgtgatcaggagcatatcaagctggaactggtagacaacaaa
tcgaataatgtaatgaacggcatcgccttcggacaaagttcgcatgtacgtttcatcaaa
accaagcgttcgtttgatatctgctacaccattgaagagaatacccataaacggggcgag
gtacagttgcagatagaggatattcaacctaattag
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integrated database retrieval system
