Bacteroides intestinalis: DXK01_000810
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Entry
DXK01_000810 CDS
T06090
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bis
Bacteroides intestinalis
Pathway
bis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DXK01_000810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bis03019
]
DXK01_000810
03400 DNA repair and recombination proteins [BR:
bis03400
]
DXK01_000810
Enzymes [BR:
bis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DXK01_000810
Messenger RNA biogenesis [BR:
bis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DXK01_000810
DNA repair and recombination proteins [BR:
bis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DXK01_000810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
AAA_lid_At3g28540
DUF6026
Motif
Other DBs
NCBI-ProteinID:
QDO71476
LinkDB
All DBs
Position
244142..246037
Genome browser
AA seq
631 aa
AA seq
DB search
MLNSQLLKEYWGYDNFRGIQEDIINSIGEGKDTLGLMPTGGGKSITFQVPALAKEGLCIV
ITPLISLMKDQVQNLKKRGIKALAIYSGMSRQEIIVTLENCIFGNYKFLYISPERLDTEI
FRTKLRKMNVSMITVDESHCISQWGYDFRPAYLKIAEIRDLLPGVPVLALTATATPEVVK
DIQARLCFRQENVFRMSFERKNLAYIVRKTENKTGELLHILRRMPGSAIIYVRNRRRTKE
ITELLINEEITADFYHAGLDDATKDIRQHRWQTGESRVMVATNAFGMGIDKPDVRIVIHL
DLPDSPEAYFQEAGRAGRDGNKAYAVILYAKSDKVTLHKRIPDTFPEKDYIKQVYEHLQY
YYQMAMGDGLGCVREFNLEDFCRKFKYFPVPADSALKILTQAGYLEYTDEQDNASRLYFT
VRRDELYKLRELGEDMDKLIQIVLRSYTGVFTDYTFINENSLAVRSGLTRQRVYDLLIRL
SKMRVIDYIPHKKTPYIIYTRERVDRQHLQISRSIYEERKERYEARIQAMVDYVTTETVC
RSRMLLRYFGEKNEHNCGICDVCLSHRAETPGLSSQQIKEEIKELLRKQPLTPADIASQI
EADKEIISQCIRELLEDEDLKAENGIISLKA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
attctcaactctcaacttctcaaagagtactggggatatgataacttccggggcatacag
gaagacatcatcaatagcattggcgaaggcaaagacaccctagggctgatgcctacgggc
ggcggaaagtccatcacattccaggtgcctgcacttgccaaagaggggctttgcatagtt
attactcctctgatttctctgatgaaagaccaagtacagaacctgaaaaaaagaggaatc
aaagcacttgccatctactccggaatgtccaggcaagagattatcgtcacgctggaaaac
tgtattttcggcaattataaattcctgtatatatcgcccgaacggttggatacggaaatc
ttccgcaccaagctacggaaaatgaacgttagcatgataaccgttgacgaaagccattgc
atttcacaatggggatatgatttccgtcctgcctatctgaagatagccgaaatacgtgat
ctcctacccggtgtccctgtgctggcactgactgcaaccgctactccggaagtcgtgaag
gacatccaggcgcggctgtgcttccggcaggaaaatgtttttcgcatgagttttgaacga
aagaaccttgcctacatagtccgcaaaacagaaaataagaccggagaacttcttcacatc
ctacgccgtatgccgggtagtgccattatttacgtacgcaatcgtcggcgaaccaaagaa
atcaccgaacttttaattaacgaagagattaccgccgacttctaccatgccggtctggat
gatgccaccaaggatatacgtcagcatcgctggcagacaggagaaagtcgtgtaatggtt
gccaccaatgctttcggcatgggtatcgacaaacccgatgtacgtatcgtaatccacctc
gatttgccggactctcccgaagcttatttccaggaagcaggacgtgcaggacgtgacggc
aacaaagcgtatgccgtaatactctatgccaaatcggacaaagtcacccttcataaacgt
atcccggacacctttccggagaaagactacatcaaacaggtatacgaacatctgcaatat
tattatcagatggcaatgggagacggtttgggatgtgtcagagagttcaatctggaagac
ttttgccggaagttcaaatacttccctgtacctgccgacagtgcattgaagattctgacg
caagcaggatatctggaatataccgacgaacaggacaatgcctcccgtctttacttcacc
gtccgccgtgatgaactgtataaattacgcgaactgggagaggatatggacaaacttatt
caaatcgttctgcgctcttacaccggagtattcacggattacacctttatcaacgagaat
tcacttgcggtacgtagcggattaacgcgacaacgggtgtacgacttgctgatacgtcta
tccaagatgcgtgtcatcgactatattccacataaaaagacaccttatatcatatacaca
cgcgaacgcgtagacaggcaacatctgcaaatctcccgcagcatatacgaggagcgtaag
gagcgttatgaagcccgcattcaggcaatggtagattatgtaacgaccgaaaccgtttgc
cgcagccgtatgcttctacgctatttcggagagaagaatgagcataactgcggaatatgc
gatgtctgcctcagccatcgtgccgagactcccgggctttcctcccaacaaataaaagaa
gaaattaaagaattgcttcgcaagcaacctctgacacctgccgatattgcctcacaaata
gaagcagataaagaaattatctctcaatgcatccgcgaattgctggaagatgaagatctg
aaggcggagaacggcataataagcctgaaggcataa
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