Bacteroides intestinalis: DXK01_001375
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Entry
DXK01_001375 CDS
T06090
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bis
Bacteroides intestinalis
Brite
KEGG Orthology (KO) [BR:
bis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bis03009
]
DXK01_001375
Enzymes [BR:
bis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DXK01_001375
Ribosome biogenesis [BR:
bis03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DXK01_001375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QDO67666
LinkDB
All DBs
Position
complement(400938..402392)
Genome browser
AA seq
484 aa
AA seq
DB search
MSTENETWRDDSSNEENSGNRFDRENNYSRPSYNREGGDRPYRPRFNSESGDRPQRAYSS
DRPYRPRFNPNAEGGERPQRSYGDRPSYNREGGDRPYRPRYNSEGGDRPQRPSYGNNSGG
DRPYRPRYNSEGGDRPQRPSYGDRPQRPRFNSGDGGQRSYNNDRPYRPRYNSGDGGDRPQ
RPYGSSSYGGSSYGDRPQRPRFNPNGGGRPGGYGRPQQRRTPDYDPNAKYSRKKQIEYKE
QFTDPNEPIRLNKFLANAGVCSRREADEFITAGVVSVNGAVVTELGTKIKRGDEVKFHDQ
PVSIERKIYILLNKPKDTVTTSDDPQARRTVMDLVKGACDERIYPVGRLDRNTTGVLLLT
NDGDLASKLTHPKFLKKKIYHVHTDKNVTKADMDQIAAGIQLDDGEIHADAISYTDDVRR
DEVGIEIHSGKNRIVRRIFESLGYKVVKLDRVFFAGLTKKGLRRGEWRYLSEQEVNYLRM
GSFE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagaaaacgaaacttggcgtgacgattcttccaatgaggagaattcaggcaac
agatttgacagagaaaacaattacagccgtccgtcttacaaccgtgaaggtggtgaccga
ccttatcgtccgcgttttaacagcgagagtggtgatcgtccacagcgtgcttacagcagt
gatcgcccgtatcgcccgcgctttaatcctaatgccgaaggtggtgaacgtccacaacgt
tcatatggtgaccgtccgtcttacaaccgtgaaggtggcgaccgtccttatcgtccgcgc
tataacagcgaaggtggcgatcgtccgcaacgcccatcctatggaaataacagtggtggt
gatcgtccttaccgtcctcgctataacagtgaaggtggcgaccgtcctcagcgtccttct
tatggtgaccgtcctcagcgcccacgttttaatagtggtgatggtggacagcgttcctat
aacaatgaccgtccttatcgtccacgctacaatagtggtgatggtggcgaccgtcctcag
cgtccttatggaagttcctcttatggtggttcttcttatggcgatcgtcctcaacgtccg
cgttttaatcccaatggtggtggaagaccgggtggatatggccgccctcaacaacgccgt
acaccggattatgatccgaatgcaaagtatagccgtaagaagcagatagaatataaggag
cagtttactgatcctaatgaaccgatccgtttgaataagttcttggctaatgcaggtgtt
tgctctcgtcgtgaggcagatgaattcatcacagcaggtgtggtttctgtaaacggagca
gtggttacagagctcggaaccaagatcaaacgcggtgacgaagtgaaattccacgatcag
ccggtaagtatcgaacgtaagatctatatcttgctgaataagccgaaagatactgtaact
acctcggatgatccgcaggcacgccgcacggtaatggatttggtgaaaggtgcttgtgat
gaacgtatttatccggtaggtcgtctggaccgcaatactacaggtgtattgctactgacg
aatgacggtgatttggcttctaagttgactcatccgaagttcctgaagaagaagatttat
cacgtacatacagataagaatgtgacaaaagctgatatggatcagattgcagctggtatt
cagttggatgatggtgaaatccatgcagatgctatcagttatacggacgatgttagacgg
gatgaagtgggcattgaaatccactcaggtaagaaccgtattgttcgtcgtatatttgag
tcactgggctacaaggtagtgaaactcgaccgcgtattctttgccggactgactaagaag
ggcttgcgtcgtggcgaatggcgctatttgagcgaacaggaagtaaactacctgcgcatg
ggctcttttgagtaa
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