Bacteroides intestinalis: DXK01_004295
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Entry
DXK01_004295 CDS
T06090
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bis
Bacteroides intestinalis
Pathway
bis03030
DNA replication
bis03410
Base excision repair
bis03420
Nucleotide excision repair
bis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DXK01_004295 (polA)
03410 Base excision repair
DXK01_004295 (polA)
03420 Nucleotide excision repair
DXK01_004295 (polA)
03440 Homologous recombination
DXK01_004295 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bis03032
]
DXK01_004295 (polA)
03400 DNA repair and recombination proteins [BR:
bis03400
]
DXK01_004295 (polA)
Enzymes [BR:
bis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DXK01_004295 (polA)
DNA replication proteins [BR:
bis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DXK01_004295 (polA)
DNA repair and recombination proteins [BR:
bis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DXK01_004295 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DXK01_004295 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
QDO68189
LinkDB
All DBs
Position
1237519..1240344
Genome browser
AA seq
941 aa
AA seq
DB search
MNSDDKLFLLDAYALIYRAYYAFIKNPRINSKGFNTSAILGFVNTLEEVLKKENPSHIGV
AFDPAGPTFRHEAYEQYKAQREETPEAIRLSVPIIKDIIRAYRIPILEVPGYEADDVIGT
LATEAGRQGITTYMMTPDKDYGQLVSENVFMYRPKHTGGFEVMGIEQVKAKFDIQSTQQV
IDMLGLMGDASDNIPGCPGVGEKTAQKLINEFGSIENLLEHTDQLKGALKTKVENNREMI
TFSKFLATIKIDVPIKLDMKALVREEPNEEELRKIFEEMEFRTLIDRVLKKSNAPSPSSA
APDLFSPGPLFAPNNGPVQGNLFEEFAGDRPNDEKESNLARLETSDFNYQLIDTEEKRSK
IIKKLLTTKILSIDTETTSAEPMEAELVGMSFSDTENQAYYVPVPPEREEALKIVNEFRP
LYENVNSTKVGQNIKYDILVLQNYGVEVKGELFDTMLAHYVLQPELRHNMDYLAEIYLHY
QTIHIDELIGPKGKNQKNMRDLPPEEVYKYACEDADITLKLKNVLEEELKKQGVEHLFYE
IEMPLVRVLANMESNGVRIDTEALKQTSEHFTARLQEIEKEIYELAGETFNIASPKQVGE
ILFDKLKIIDKAKKTKTGQYVTSEEVLESLRNKHEVIGKILEYRGLKKLLGTYVDALPLL
INPRTGRIHTSFNQAVTATGRLSSSNPNLQNIPIRDEDGKEIRKAFIPDDGCEFFSADYS
QIELRIMAHLSEDKNMIDAFLSGYDIHAATAAKIYKIDIKDVTPDMRRKAKTANFGIIYG
ISIFGLAERMNVDRKEAKELIDGYFETYPQVREYMDKSIQVAREQGYVETIFHRKRFLPD
INSRNATVRGYAERNAINAPIQGSAADIIKVAMARIYERFQSYKLKAKMILQVHDELNFS
VPKAEKEFVQQIVIEEMERAYRMHVPLRADCGWGKNWLKAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgacgataaactgtttcttctcgatgcttatgcattgatatatcgcgcttat
tacgcatttatcaagaacccacggattaactccaaaggtttcaacacttctgccattctg
gggtttgtaaatacccttgaagaagtactcaaaaaagaaaatccatcacatattggtgtg
gcgttcgacccggcaggtcctaccttccgacatgaggcctacgaacagtataaagcacag
cgggaagaaactccggaagcaatccgtctctccgtacctattataaaagatattattcgt
gcctatcgcatccccatcctggaagtaccgggctatgaagcggacgacgtcataggcacg
cttgctactgaggcaggccgccaaggcatcacaacttatatgatgacaccggataaagac
tatggacaactggtatctgaaaatgtattcatgtaccgccccaaacatacaggtggtttc
gaggtcatgggtatagaacaggtaaaagctaagtttgatatccaatcgacccagcaggta
attgacatgttgggactaatgggtgacgcatccgataacattcccggctgtcccggcgta
ggagagaaaaccgcacaaaagttaatcaacgaattcggcagcatcgaaaatcttctggaa
cacaccgaccaactgaaaggtgccttgaagactaaagtcgaaaacaatcgcgaaatgatt
accttctccaaatttcttgcaacaatcaagattgatgttcccatcaaacttgatatgaaa
gcactcgttcgtgaagaacccaacgaagaagaacttcggaaaattttcgaagagatggaa
tttcgtacactcattgatcgcgtactcaaaaaaagtaatgccccctctccttcttccgct
gctcccgatcttttttcaccaggtccgctttttgccccaaataatggcccggttcaaggc
aatttgtttgaagaatttgcgggcgaccgaccgaatgatgaaaaagaatcgaatctcgcg
cgtttagaaaccagcgatttcaactatcaactcattgatacagaagagaaaagatccaaa
attattaaaaagttacttacaacgaaaattctctcaatagataccgaaacgacctctgct
gagccaatggaggcagaattggtaggaatgagtttcagtgacaccgaaaatcaggcctac
tatgttccggttccacctgaacgggaagaggcgttaaaaatagtaaatgagtttcgacct
ctttacgagaatgtaaattcaacgaaagtcggacaaaacatcaagtacgatattttggtt
cttcaaaattacggagtggaggtgaaaggtgaacttttcgacaccatgcttgcacattat
gtattgcaacccgaacttcgccacaatatggattatctggcagaaatttatctgcactat
caaactatccatatcgacgaacttatcggaccgaagggaaagaatcaaaagaacatgcgc
gacctcccaccggaggaagtttacaaatatgcttgcgaagatgcggacattaccctgaaa
cttaaaaacgttcttgaggaagaattaaagaaacaaggcgtggaacacctcttctatgaa
atagagatgccactcgtacgtgtgcttgccaatatggaaagcaacggagtgcgtattgac
accgaagcactgaaacaaacatccgagcacttcactgcccgcttgcaggagatcgaaaaa
gaaatctatgagctggcaggtgagacattcaatatcgcttcacctaaacaggtaggtgag
atcctttttgacaagctgaaaattatagataaagccaaaaagacaaagacagggcaatat
gttacttcggaagaagtgttggagagcctacgcaataaacatgaagtcattggaaagata
ctcgaatatcgtggactgaagaaactgctgggaacctatgtagatgctcttcctctattg
atcaatccacgtaccgggcgcatccatacttcctttaaccaggcagtcacggctaccgga
cgcctcagttccagtaatccgaacctgcagaacatccctatccgtgatgaggatggaaag
gaaatccgcaaggcttttattccggatgatggctgcgagttcttctctgccgactattcg
caaatagaattgcgcattatggcgcatctaagcgaagataagaatatgatcgacgcattc
cttagcggttatgacattcatgccgccaccgccgctaaaatatataaaatagatatcaaa
gacgtcacccccgatatgcgccgtaaggcaaagaccgccaatttcggtatcatctatggt
atttctatctttggtttggcggaacgtatgaacgtggaccggaaagaagctaaagaactg
attgacggatactttgaaacttacccgcaagtacgcgaatatatggataaaagtatccag
gtggcgcgtgagcaagggtatgtggaaaccattttccatcgcaaacgcttcttacctgat
atcaactcgcgaaatgcaaccgtacgcggatatgcagagcgcaatgctatcaacgcacct
attcaaggaagcgctgccgatatcatcaaagttgccatggcacgcatctatgaacgcttc
caaagttacaaattgaaagctaagatgattttacaggtccatgacgaactaaatttcagc
gttccaaaggctgaaaaagagtttgtgcaacaaattgtaatcgaagagatggaacgcgca
tatcgcatgcacgtacccctgagagccgattgtggatggggaaagaactggttaaaggcc
cactaa
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