Bacteroides intestinalis: DXK01_005125
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Entry
DXK01_005125 CDS
T06090
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bis
Bacteroides intestinalis
Brite
KEGG Orthology (KO) [BR:
bis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bis03016
]
DXK01_005125 (miaB)
Enzymes [BR:
bis01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DXK01_005125 (miaB)
Transfer RNA biogenesis [BR:
bis03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DXK01_005125 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QDO68341
LinkDB
All DBs
Position
1486327..1487694
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AA seq
455 aa
AA seq
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MEKITGADFKSATADDNKKLFIETYGCQMNVADSEVIASVMQMAGYSTADTLEEADAVFM
NTCSIRDNAEQKILNRLEFFHSLKKKKRNLIVGVLGCMAERVKDDLITNHHVDLVVGPDA
YLTLPDLVAAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCIV
PYTRGRERSRDVESILNEVSDLVVKGYKEVTLLGQNVNSYRFEKPDGEVVTFPMLLRTVA
EAAPGVRVRFTTSHPKDMSDETLEVIAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWY
LGRVDAIRRIIPDCGLSTDIFSGFHSETEEDHLLSLSLMEICGYDSAFMFKYSERPGTYA
SKHLPDDVSEEVKIRRLNEIIALQNRLSAESNARCIGKTYEVLVEGVSKRSREQLVGRTE
QNRVVVFDRGTHRVGDFVMVKITEASSATLKGEEV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaataacgggagcagactttaaatctgcaactgctgatgacaacaagaagttg
ttcattgaaacctatggctgccagatgaacgtggcggacagtgaagtgattgcctctgtg
atgcagatggcgggatactcaacggcagatacgttggaagaagcggatgccgtgtttatg
aacacctgctccattcgcgacaatgccgaacagaaaatcctgaatcgtttagagttcttc
cattcacttaaaaagaaaaaacgaaatctgattgtgggagtattgggatgtatggccgag
cgggtaaaggatgatttgataacgaatcatcacgtcgacttggtggtagggcctgatgct
tatctcactcttcctgatctggttgcagctgtagaggcaggcgagaaagctatcaatgtg
gagctttctactaccgaaacttaccgagatgtgatcccttcgcgtatttgtggaaaccac
atttccggatttgtatccatcatgcgcggatgtaataacttctgtacgtattgtatcgtt
ccctatacccgtgggcgggagcgtagtcgtgatgtggaaagcatccttaacgaagtgtcc
gacctcgtggttaaaggctataaggaagttactctgttgggacaaaacgtaaattcctac
cgttttgagaaaccggatggggaggttgttactttccctatgctgctccgtactgtagcc
gaggctgcgccaggggtacgtgtccgtttcactacttcgcaccctaaagatatgagtgac
gaaacgctggaagtcattgcacaagtccctaatgtatgtaagcatatccatctgcctgta
caaagtggaagctctcgtattctgaaattgatgaatcgtaaatatacccgtgagtggtat
ttgggacgtgtggatgctattcgtcgtatcatccccgattgtggtctgtctacagatata
ttttccggtttccattccgaaacggaggaagatcacctgctttccctttccttgatggaa
atatgtggttacgattcggctttcatgtttaaatattccgagcgtccgggtacgtatgct
tccaagcatctgccggatgatgtatctgaagaggtgaagatacgtcggctgaatgagatt
atcgctttgcagaatcgtctgtctgccgagtctaacgcccgttgcattggcaagacttat
gaagtgttggtagaaggagtttccaaacgttcccgcgagcagcttgtaggacgtacagag
caaaatcgggtggtagtattcgaccggggtacacatcgcgtgggtgattttgtaatggtg
aagattaccgaagccagttccgcaacgctgaagggggaagaagtctga
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