Bacteroides intestinalis: DXK01_007130
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Entry
DXK01_007130 CDS
T06090
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bis
Bacteroides intestinalis
Pathway
bis02020
Two-component system
bis02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bis00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DXK01_007130 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DXK01_007130 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bis03021
]
DXK01_007130 (rpoN)
Transcription machinery [BR:
bis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DXK01_007130 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
DUF7090
LacI
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QDO68712
LinkDB
All DBs
Position
complement(2017654..2019144)
Genome browser
AA seq
496 aa
AA seq
DB search
MAQGSRQVQTQAQQQVQTLSPQQILVVKLLELPAVELEDRIHAELLENPALEEGKEDTAS
DDFSENSDTGGSAEDNGANEYDSLSDYLSEDDIPDYKLQENNRSKGEQAEEIPFSDATSF
YETLKEQLSERDLTEHQRELAEYLIGSLDDDGLLRKSLDSICDELAIYAGIECTQEELEE
ALKIIQDFDPAGLGARNLQECLLIQIHRKIEQQHFTPNPLLYIEEAIISECYEEFTRKHW
DKIQQKLGLEEDAFEQAIKEICKLNPRPGASLGEAIGRNMQQIIPDFIVDTYDDGTINLA
LNNRNVPELRMSRDFTEMVEEHTKNRANQSKESKEAMMFLKQKMDAAQGFIDAVKQRQNT
LMTTMQAIIDLQRPFFLEGDESLLRPMILKDVAERTGLDISTISRVSNSKYVQTNYGIYS
LKFFFNDGYVTEDGEEMSVREIRKILKECIDNEDKKKPYTDDELTDILKEKGYPIARRTV
AKYRQQLNIPVARLRK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaggttccagacaagtacaaactcaagcgcagcaacaggtacagacactgtcg
ccccagcagattctggtagtgaagctactggaattgcccgctgtagaactggaagaccgt
atacatgcggaacttctggaaaatccggctctggaagaaggaaaggaagatacggcaagt
gacgacttttctgaaaattccgatacgggaggttccgcagaagacaacggagccaatgaa
tatgattcattaagcgactatctgagcgaagacgatatccccgactacaaattgcaggaa
aacaaccgtagcaaaggtgaacaggctgaagaaatacctttctccgatgctacttctttt
tacgaaactctgaaggagcaactaagcgaacgtgacctgaccgagcatcagcgtgaactg
gcggaatatctgatcggatcattggatgacgacggcctgctacgtaagtctctggatagc
atctgtgatgaacttgccatctacgccggcatcgaatgcacccaggaggaattggaagaa
gcactgaagattatccaggactttgaccccgccggacttggcgcacgcaacctgcaagaa
tgcctgctcattcagattcatcgcaagatagaacaacagcacttcaccccgaaccctcta
ctttatatagaagaagcgatcatctccgaatgttacgaagaattcacccgtaagcattgg
gacaagatacagcagaagctcggactggaagaagacgcttttgaacaggctatcaaagag
atctgcaaactcaatccgcgtccgggtgcctccctgggtgaagccatcggccggaacatg
caacagatcatccccgacttcattgtagatacatacgacgacggtaccatcaatctggct
ctgaacaaccggaacgttccggaactgcgtatgagccgcgacttcaccgagatggtggaa
gaacataccaaaaacagggctaaccagtcgaaagagtcgaaagaagccatgatgttcctg
aagcagaaaatggatgcagcacaaggctttatcgatgccgtgaagcaacgtcagaataca
ttaatgactactatgcaagccattatcgacctgcaacgtccgttcttcctcgaaggagac
gaatcattgctgcgtcctatgatattgaaagatgttgccgaacgtaccggactggacatt
tcaaccatttcccgcgtcagcaacagcaaatatgtgcaaaccaactacggcatctattca
ctgaaatttttcttcaatgacggatatgtcaccgaggacggtgaagaaatgtctgtacgc
gagattcgtaagatattgaaggaatgcattgacaatgaagataaaaagaaaccttatacg
gatgatgaactgacggatatactgaaagaaaaaggatatccgatagcacgccgcacggta
gccaagtacaggcaacagttgaacataccggtggcaaggctgagaaagtaa
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