Bacteroides intestinalis: DXK01_007505
Help
Entry
DXK01_007505 CDS
T06090
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bis
Bacteroides intestinalis
Pathway
bis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DXK01_007505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bis03019
]
DXK01_007505
03400 DNA repair and recombination proteins [BR:
bis03400
]
DXK01_007505
Enzymes [BR:
bis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DXK01_007505
Messenger RNA biogenesis [BR:
bis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DXK01_007505
DNA repair and recombination proteins [BR:
bis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DXK01_007505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDO68783
LinkDB
All DBs
Position
2111200..2113641
Genome browser
AA seq
813 aa
AA seq
DB search
MTETQEETVRRLPELKERHLPGDCREAVHTLLKGTYGYEQFRDLEVYDDLFKGKETLHVS
QGQLIESVIVEAEKARNGETDVDNILLTAPTGAGKSLLFQLPGIYLGNEYGLLTIVVSPL
KALIVDQVEGLQDLGYTRVAYASSDLSPEQKNEVYRQVREGEVDLFYLSPELLLSYDIKH
FAGERRIGLVVVDEAHTVTTWGKEFRVDYWFLGRYLQGLKKNLGYAFPLFALTATAVWNP
KGGNDMVFETIRSLQMEPCVLYAGTVKRRNIGFDIRQMEIEEGETYDKAKQRVVAGRVDD
FLDGYKTILYYPFAGGIDMRLKTWVQPADWRLVASYYGKKDKEQKAAIVQEFKEGEKRMI
VATKAFGMGVDISDIDRVYHVAPSSTFVDYIQEIGRAARDTDIHGVSATDYHERDFYYMK
RLHMAGNIAQEQLALILKKLMEVYRMKGEKQEMLVSLSDFEFVVKLPRMKNKLEYEAELG
QLIKTALLWLEDDLSHRYGKKLLEVSPQNLLTEGYIQDKTGDVFIREFKDYLTKVEGTED
VYTARLEKLWEERFAELGYREFKQKLNSGTLWEGSRAVSVGKHEVLLKEDATVIRQRMDA
LFNSLKTLLVDKLRKAKGRFDEEELRAVFAEHGMDVPSAKRFIGSLLESRTEEGRSVSYI
SSVKKKDSNELSFTVTKGFDLLLSRYQKLFSQRIVGKKGDRLLFYSTPFSDLNMLLNLLS
ILDCLSFSVEGGGTPCVLVYFDDPESLQQIASSDEYHNLILENNEQVFQEQIELFSFFFG
TDGMDDVKRWDFIEDYFTGMGVEELKAKYAVPL
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacacaagaagaaacggtacgccgcttgccggaattgaaagaacggcatttg
cccggagattgccgggaagcggtgcatacactgttaaaagggacttacgggtacgaacaa
tttcgtgacctagaagtgtatgacgacttattcaaggggaaagagacactccacgtttcg
caggggcaattgatagaaagtgtcattgttgaagcggaaaaggcacggaatggggaaacg
gatgtggataatattctgctgacagcgcctaccggggctggaaaatccttattgttccaa
ttgcctggcatctatttgggcaatgaatacgggttgcttaccattgttgtatctcctctg
aaggcactgattgtggatcaggtggaaggtttacaagatttgggatacacacgcgtagcg
tatgcttcttccgatttatcgcctgagcaaaagaatgaggtatatcgacaggtgcgtgaa
ggtgaggtcgatttgttttatctttcgccggaattattgctttcatatgatatcaagcac
ttcgcaggtgagcgtcgtattggtttggttgtagtggatgaggctcatacagtaactacc
tggggtaaagagttccgggtggattattggttcctgggacgttatctgcagggtttgaag
aagaatctgggctatgcgtttccgctttttgcgctgacggctactgctgtttggaacccg
aagggaggcaacgatatggtgttcgaaacgattcgttcgttgcaaatggagccgtgtgtg
ctttatgcaggtacggtgaaacgcaggaatatcggattcgatattcggcagatggaaata
gaagaaggcgaaacgtacgataaagccaagcaacgtgtagtggcgggtcgtgtagatgat
ttcctcgacgggtataagacgattctttattatccttttgcgggtggcatcgatatgcgt
ctgaagacgtgggtgcaacctgctgattggcgtttggtagcttcttactatggcaagaag
gacaaggaacagaaagcagcaattgtacaggagttcaaggaaggagagaagcgtatgatt
gtagctacaaaggcattcggtatgggtgtggatatcagcgacattgaccgggtatatcat
gtggcaccttccagcacttttgtcgattatatacaggagataggacgtgcggcgcgtgat
acggatattcatggagtttcggcaacggattatcatgaacgtgacttttattatatgaaa
cgcctgcatatggcgggtaatatagcacaagagcagttggcgttgatactgaaaaagctg
atggaagtatatcggatgaaaggcgaaaagcaggaaatgctggtgtctttgtccgacttc
gaatttgtggtgaaattgccgcgaatgaaaaacaagctggaatacgaggcagaattggga
cagttgattaagacagctttattatggttggaagatgatttaagccatcgttacggaaag
aagttgttggaggtcagtccgcagaatctattgacggaaggatatattcaggataagaca
ggcgatgtttttattcgtgaattcaaggattatcttactaaagtggaaggtacggaagac
gtgtacacagcacgtctggaaaaactgtgggaagagcgctttgctgagttggggtatcgg
gaatttaagcaaaagttgaatagtggaacattgtgggaaggctctcgtgcagtatctgtt
ggtaagcatgaggtgttgttgaaagaagatgctacggtaattcgtcagcggatggatgca
ctgttcaatagcttgaagactctgcttgtcgataagttacggaaggcaaaaggacgtttt
gatgaagaagaattgcgtgcggtatttgccgaacatggtatggatgtaccatcggcaaaa
cgctttattggctcattgctggagtctcgtacggaagaggggcgcagtgtgagttatatc
agtagtgtgaaaaagaaggattccaacgaactctcttttacagtgacaaaggggtttgac
cttttgttgtcccgctatcagaaactattcagtcaacgtattgtcggtaaaaaaggagat
cgtctgttgttttacagtacgccattctccgatctgaatatgttgcttaacctgctttcc
atactcgattgtctttcattcagcgtcgaaggaggggggacaccttgtgtactggtatat
ttcgatgatccggagagtttgcagcagattgcatcttccgatgaatatcacaatttgatt
ctcgagaataatgaacaggtgttccaggaacagatcgaactgttttctttcttcttcgga
acggacggaatggacgatgtgaagcgctgggattttattgaagactattttaccggaatg
ggggtagaggagctgaaagcgaagtacgctgttcccctatag
DBGET
integrated database retrieval system
