Bacteroides intestinalis: DXK01_015850
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Entry
DXK01_015850 CDS
T06090
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bis
Bacteroides intestinalis
Pathway
bis03030
DNA replication
bis03430
Mismatch repair
bis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DXK01_015850 (holA)
03430 Mismatch repair
DXK01_015850 (holA)
03440 Homologous recombination
DXK01_015850 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bis03032
]
DXK01_015850 (holA)
03400 DNA repair and recombination proteins [BR:
bis03400
]
DXK01_015850 (holA)
Enzymes [BR:
bis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DXK01_015850 (holA)
DNA replication proteins [BR:
bis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DXK01_015850 (holA)
DNA repair and recombination proteins [BR:
bis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DXK01_015850 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
POTRA_1
PTA_PTB
HTH_57
Motif
Other DBs
NCBI-ProteinID:
QDO70291
LinkDB
All DBs
Position
complement(4172250..4173269)
Genome browser
AA seq
339 aa
AA seq
DB search
MAKQEITCDDILKELRAKQYRPVYYLMGEEPYYIDLIADYITDNILTETEKEFNLTVVYG
ADVDIATVINAAKRYPMMSEHQVVVVKEAQNIRNMEELSYYLQKPLLSTILVICHKHGVL
DRRKKLAAEIEKTGVLFESKKVKDAQLPAFITSYMKRKGIDVEPKATAMLADFVGADLSR
LTGELEKLIITLPKGHTRVTPEQIEKNIGISKDYNNFELRSALVEKDVLKANKIIKYFEE
NPKTNPIQMTLSLLFGFFSNLMLAYYAPEKSEQGIANMLGLRTPWQAKDYLAAMRRYNGV
KTMQIIGEIRYADAKSKGVGNPSLSDGDILRELVFKILH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaggaaatcacgtgtgatgacatcttaaaggaactgagagcgaaacaatac
cgtcccgtctattatcttatgggcgaggaaccctattacatcgacctcattgccgactat
ataaccgacaatattctgaccgaaacggaaaaggagttcaacctgaccgttgtctacggg
gcagatgtggatatagctactgttattaatgccgccaagcgttatccgatgatgtccgaa
catcaggtggtggtggtaaaggaagcgcagaatatccgtaatatggaagagctttcttat
tacctccaaaagccgctgctttctaccatattagtaatatgccataaacatggcgtactg
gatcgaagaaagaagctggctgccgaaatcgaaaagactggtgtcctgtttgaatctaaa
aaagtgaaggatgcgcaactgcctgcattcatcacctcttatatgaaacgtaaaggtatc
gacgtggaacctaaagccactgccatgctggctgatttcgttggtgccgacctcagtcgc
ctcacgggagaactggaaaaactgatcattacacttccaaaaggtcatacacgcgttacc
cccgaacagatagagaagaacattggtatcagtaaggattataacaacttcgaattacgc
agtgccctcgttgaaaaggacgtcttgaaagctaataagataataaaatattttgaagaa
aatccgaaaacaaacccaattcaaatgactttatctttactttttggattcttttctaac
ttgatgttggcctattatgcccctgaaaaatcggagcaaggcatagccaacatgttggga
ctacgcacaccctggcaggccaaagactatcttgcagctatgcgccgatataatggagta
aagaccatgcaaattatcggagaaatacgatatgcggatgcaaaatctaaaggagtggga
aatccatctttaagtgacggggatattcttcgcgaactggtcttcaagatcctgcattaa
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