Bacteroides intestinalis: DXK01_017495
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Entry
DXK01_017495 CDS
T06090
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
bis
Bacteroides intestinalis
Pathway
bis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DXK01_017495 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bis03400
]
DXK01_017495 (uvrB)
DNA repair and recombination proteins [BR:
bis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DXK01_017495 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DXK01_017495 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
EAD4
Kinesin
SrpI-like
HIND
Motif
Other DBs
NCBI-ProteinID:
QDO70590
LinkDB
All DBs
Position
4557998..4560046
Genome browser
AA seq
682 aa
AA seq
DB search
MNKFELTSAYKPTGDQPEAIAELTEGVLQGVPAQTLLGVTGSGKTFTIANVIANINKPTL
ILSHNKTLAAQLYSEFKAFFPNNAVEYYVSYYDYYQPEAYLPSSDTYIEKDLAINDEIDK
LRLAATSSLLSGRKDVVVVSSVSCIYGMGNPSDFYENVIEVQQGKAFSRNVFLRRLVDSL
YVRNDIDLNRGNFRVKGDTVDIYLAYADNLLRIIFWGDEIDSIEEVDPISGVTIARFDTY
KIYPANLFMTSKEATLRAIHEIEDDLHKQVQWFENEGRPFEAKRLQERVTYDMEMIRELG
HCSGIENYSRYFDGRSAGSRPYCLLDFFPEDFLIVIDESHVSVPQIRAMYGGDRARKINL
VEYGFRLPAAMDNRPLKFEEFEEMAKQVIYVSATPADYELIQSEGVVVEQVIRPTGLLDP
IIEVRPSHNQIDDLMEEIQIRIEKNERTLVTTLTKRMAEELTEFLLNNNVKCNYIHSDVD
TLERVKIMSDLREGLYDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTAGR
AARNVNGMVIMYADRITESMQLTIDETNRRREKQLKYNEEYGITPQQIKKAKNLNVFAPN
TALENGFTEKGTTTPRPYVEQESSASIAADPIVQYMSRPQLEKSIERTRKLMQEAAKKLD
FIEAAQYRDELLKMEDLLKEKT
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttgaattaacatccgcctataagccaaccggagatcagccggaagctatt
gcagagctcactgagggcgtacttcagggggttcctgcacaaacattacttggtgtcacc
ggttcgggaaagacgttcaccatagccaacgtgattgccaatatcaataaaccaacgtta
atattgagccataacaaaacattggcagcgcaactttacagtgagtttaaagctttcttc
cccaataatgctgtagagtattacgtttcttattatgattattaccaacccgaagcttat
ttgccgtcttcggatacctatatagaaaaagaccttgccatcaatgatgagatagacaaa
ctgcggcttgcagccacctcttccctactttcaggtcggaaagatgtagtggtagtgtct
tctgtatcttgtatatacggtatgggaaatccgtcggatttctatgagaatgtgatagaa
gtacaacaaggaaaggcattcagccggaatgttttcctgcgtcgtctggtagacagcctc
tatgtacgcaatgatattgatctgaaccgcggaaacttccgtgtgaagggagatacagta
gacatctatctggcttatgcagataatctgctacgcattattttttggggagatgaaata
gatagtattgaagaagtcgatccgataagcggtgtaactatcgctcgtttcgacacatac
aaaatatatccggccaacctcttcatgacttccaaagaggccaccctgcgagctatccat
gagatagaagatgatctgcataagcaggtgcaatggtttgaaaacgaaggccgtcccttt
gaagcaaagcgcctccaggaacgggtaacatatgatatggaaatgatacgcgaattaggt
cattgctctggtattgaaaactattcgcgctactttgacggccgtagtgccggtagccgt
ccctattgtttattggacttctttccggaagactttctgatcgttatagatgaaagccat
gtgagtgtacctcaaatacgtgccatgtatggtggtgatcgtgcccgtaaaatcaacctt
gtagaatatggtttccgccttccggctgccatggacaatcgtccgttgaaatttgaggag
tttgaggagatggcaaaacaagtaatctatgtaagcgccacacctgccgattatgaattg
attcagtcggaaggcgttgttgtggaacaggttattcgccctacaggcttgctggatccg
attatcgaagtacgtcccagccacaatcaaatagacgacctcatggaggaaatccagatt
cgcatcgaaaagaatgaacgtacgctggtcactacgcttactaagcgcatggcagaagaa
ttaacggaattcctgctgaataacaatgtgaagtgtaactatatccatagcgatgtagat
acattggaacgcgtaaagattatgagcgatttgcgtgaagggttatacgatgtccttatt
ggtgtcaatctgttgcgtgaaggattagacctgccggaagtctcactcgtggcaattctc
gatgcagacaaggaaggtttcctacgctcacaccgctcactgacgcagactgccggacgt
gccgcccgaaatgtaaacggtatggttatcatgtatgccgaccgtatcacagaaagcatg
caattgacgattgacgaaaccaaccgtcgccgtgaaaagcaactaaaatataatgaggaa
tatggtatcactccccaacaaatcaaaaaggcaaagaacctcaatgtatttgcacccaat
actgcactggaaaatggctttaccgaaaaagggacaaccactccccgtccctatgtcgag
caagaaagttccgccagcattgctgccgaccctattgtgcaatacatgtcccgtccgcaa
ctggaaaagagtatcgaacgtaccagaaaactcatgcaggaggctgccaagaagctcgac
ttcatcgaagcagcacaatatcgggacgaattgctgaaaatggaggatctgttgaaagag
aaaacataa
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