Bacteroides intestinalis: DXK01_017750
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Entry
DXK01_017750 CDS
T06090
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
bis
Bacteroides intestinalis
Brite
KEGG Orthology (KO) [BR:
bis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bis03400
]
DXK01_017750 (sbcD)
DNA repair and recombination proteins [BR:
bis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DXK01_017750 (sbcD)
Archaeal homologous recombinant proteins
DXK01_017750 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Med15_C
Motif
Other DBs
NCBI-ProteinID:
QDO70631
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All DBs
Position
4614440..4615657
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AA seq
405 aa
AA seq
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MKILHTSDWHLGHTLYNYDRSREQQAFLKQLTRIVAEEMPDAMVVSGDIYHYSTPSASTQ
KMYTDGMLEIHRACPEMTIVVTAGNHDSSSKLEIDSSLWNHFGVKVVGNIERNQEEVNLE
KHIVEVRNDRGILKGYIIAIPHVYPQNFPILDTETPREERQARFFQALQDEVEKMNAERL
PVVLMAHLSIEGSDQTGHDDTVGGIEYVPISAMGGGYDYLALGHIHCPQNIKGSRHCARY
CGTPLPVSFDEAYPHSVSIVEIQREKAPQIKTIEIENPMPLITLPKEAVDFEEAIKLLEE
YPDDKPAYIRLNVLIKDYLAPDCNERASNAVKGKNCKFCYIKPNREKHTSDDETKHISIQ
EMQEMSPLEIAKLYFQEAEGKEMDEELCELMNSVVQKVKEKSILH
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacttcataccagcgactggcatctgggacatacactatacaactatgaccgc
agtcgcgagcaacaagcattcctaaagcaactaacccgcattgtggcagaagaaatgccg
gatgcaatggtcgtcagcggagacatctaccactactccaccccatcggcaagtacacag
aagatgtacacggacggtatgctcgaaattcacagggcatgccccgaaatgacaattgta
gtaactgccggaaaccacgacagcagttcgaaattagagatagacagtagtctgtggaac
catttcggtgtaaaggtagtaggaaacatagaacgaaaccaggaagaagtaaatctggaa
aaacacatcgtagaagtgagaaacgacagaggaatactaaaaggatatattatcgccata
cctcacgtctatccgcaaaacttcccgatactggacacagaaacacctcgagaagaacgg
caggcacgctttttccaagcattgcaagatgaagtagaaaaaatgaatgcggaaagactg
cctgttgtattgatggcacacctttccatagaaggcagcgaccaaaccgggcatgacgat
accgtaggcggaatagaatatgtccctatcagtgcaatgggcggaggatacgattatctg
gcactcggtcatatccattgcccacagaacattaaaggaagcaggcattgtgcacggtat
tgtggcactcccctgcctgtcagcttcgacgaggcttatccacattctgtttccattgtt
gaaatacaaagagaaaaagcacctcagatcaaaacaattgaaatagagaatccgatgcca
ctcatcacgctacccaaggaagctgtagattttgaagaagctataaaactgctggaggaa
tacccggatgacaaaccggcttatatccgcttgaatgttctgataaaagactatctggcg
cccgactgcaacgaacgtgcatcgaacgcggtaaaagggaagaactgcaaattctgctat
atcaagcccaatcgggagaagcatacttcagatgatgaaaccaagcatatctctattcag
gaaatgcaggaaatgtccccattggaaatagcaaaactttattttcaggaagcagaagga
aaagaaatggatgaggaactctgcgaactgatgaatagcgtagtacaaaaggtaaaagag
aaaagcattctgcattaa
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