Bacteroides intestinalis: DXK01_020200
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Entry
DXK01_020200 CDS
T06090
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bis
Bacteroides intestinalis
Pathway
bis02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bis00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DXK01_020200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bis03021
]
DXK01_020200
Transcription machinery [BR:
bis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DXK01_020200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
GerE
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_23
HTH_28
HTH_7
Sigma70_r3
HTH_11
HTH_VMAP-M9
HTH_38
IbrB_C
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
QDO71074
LinkDB
All DBs
Position
complement(5236670..5237224)
Genome browser
AA seq
184 aa
AA seq
DB search
MVTETSHTLISIRLNEREFHNVFDKYYVALCLFANQYTEDEETSADIVQDSFAKLWQIRD
DFFYLHQVKAFLYTAVRNKALNELEHSKVVFEYAQKVIEKKKDSFFHDAVVEEETYRILA
EAIDKLPDQMRAIMRLAMEGKKNAEIAEQLNVSVETVHTLKKIAYKKLRIYLKEYYYFLI
LFYL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtggttacagaaacttctcatacactcattagtattaggcttaatgaacgggagttccat
aatgtttttgataaatattatgtggcactttgtttgtttgcaaaccaatatactgaagat
gaagaaacctctgctgatattgtacaggattcctttgcaaaattatggcaaattagagat
gattttttctatttgcatcaagtcaaagctttcctttatacagccgtgcgcaataaggcg
ttgaatgaattggagcattctaaggtagtatttgaatatgctcaaaaagttattgaaaag
aaaaaggattctttcttccatgatgcagtagtggaagaagaaacttaccggattctggca
gaagctattgacaaacttcctgatcagatgcgggctattatgcgattggctatggaagga
aaaaagaatgctgaaatagctgagcaattaaatgtatctgttgaaactgtacatactctt
aaaaagattgcatacaaaaagcttcgtatatatctgaaagagtattactatttccttata
ctcttttatttataa
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integrated database retrieval system
