KEGG   Bacteroides intestinalis: DXK01_021235
Entry
DXK01_021235      CDS       T06090                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
bis  Bacteroides intestinalis
Pathway
bis03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DXK01_021235 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bis03400]
    DXK01_021235 (uvrA)
DNA repair and recombination proteins [BR:bis03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DXK01_021235 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DXK01_021235 (uvrA)
SSDB
Motif
Pfam: ABC_tran UvrA_inter AAA_21 SMC_N UvrA_DNA-bind AAA_29 AAA_16 DnaJ_CXXCXGXG nSTAND1 nSTAND3 RsgA_GTPase AAA_33 AAA_22 NACHT SLFN-g3_helicase Viral_helicase1 cobW FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: QDO71261
LinkDB
Position
5522702..5525479
AA seq 925 aa
MIKNNSILIKGARVNNLKNIDVEIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESL
SSYARQFLGRMSKPECDFIKGIPPAIAIEQKVSSRNPRSTVGTSTEIYEYLRLLYARIGR
TFSPISGEEVKKHSTEDIVNCMLGYPEGTRYTVLAPILLREDRTMKQQLDIDMKQGFNRL
EVNGEMVRIDEYEPKKEDTVFLLIDRMVASKEKDAISRLTDSAETAMYEGDGACLLRFYQ
PDGTTSLYRFSTKFEADGITFEEPSDQMFSFNSPIGACPECEGFGKVIGIDEHLVIPNRS
LSVYDGAVVCWRGEVMGEWKDMVIRGAEKAGFPIFTPYFELTNEQRRMLWEGTPYFQGIN
AFFKMVQENQYKIQYRVMLARYRGKTLCPKCHGTRLKPEASYVRVGGRNISELVDLPITE
LKTFFDNLQLDKHDTDVATRILTEINSRIRFLLDVGLGYLTLNRLSNSLSGGESQRINLA
TSLGSSLVGSLYILDEPSIGLHSRDTDKLIHVLRQLQQLGNTVVIVEHDEEIIRAADYII
DIGPKAGRLGGQVVYQGDMKDLQPNSDSYTVRYLLGEEEIPVPEHRRPWNNYIELTGARE
NNLKGVNVRFPLNVMTVVTGVSGSGKSTLVRDIFFRALKRELDECSERPGEFASIGGDLQ
NLRNVEFVDQNPIGKSSRSNPVTYIKAYDEIRKLWAEQPLAKQMGYTAGYFSFNSEGGRC
EECKGDGTITVEMQFMADLVLECETCHGKRFKADTLEVKFHDANIYDVLEMTVNQAVEFF
TKHGQKKIVKKLAPLQDVGLGYIKLGQSSSTLSGGENQRVKLAYYLSQEKADPTLFIFDE
PTTGLHFHDIRKLLEAFDALILRGHSIVIIEHNMDVIKCADYVIDLGPEGGNKGGNLVAA
GTPEEVARCAESYTGQFLQEKLHMK
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgataaaaaacaactccatacttatcaaaggcgcacgcgtcaacaacctgaaaaatata
gacgtagaaatacccagaaacaaacttgtcgttatcaccggactatccggttccggtaaa
tcatccctggcattcgacacgctatatgcagaaggacaacgtcgttatgtagaaagcctg
agcagttatgcccgccagttcctgggacgtatgagcaagccggaatgtgactttattaaa
ggaattccgccagctattgccatagaacagaaggtgagtagtcgcaacccacgatccacc
gtcggtacctctaccgaaatttacgaatacctgcgtttactgtatgcacgcatcggacga
acattcagtcccatcagcggagaggaagtaaaaaaacattccacagaagatatcgtaaac
tgtatgttaggatatccggaaggaacaagatacaccgtactggctccgatattactccgc
gaagaccgaacgatgaagcaacaattagatatcgatatgaaacaaggtttcaaccgtctg
gaagtaaacggagaaatggttcgtatcgacgaatacgaacctaaaaaagaagatactgtt
ttcttattgatagaccgtatggtagcatctaaagagaaagatgcaatcagccggttaaca
gattctgccgagacagccatgtacgaaggtgacggtgcttgcctgctgcgattctatcaa
cctgacggaacaaccagcctataccgcttcagcactaaattcgaggcagacggcattact
tttgaggagcccagtgaccagatgttttctttcaattcccctattggtgcatgtcctgaa
tgtgagggtttcggcaaggtaatcggcattgatgaacacttggtaatacccaaccgctca
ttatccgtatacgacggtgccgtggtatgttggcgaggcgaagtgatgggcgaatggaaa
gacatggtaatacgcggtgctgaaaaagccggtttcccgatcttcaccccctactttgaa
cttacaaacgaacagcgccgcatgttatgggaaggcaccccttacttccaaggaatcaat
gctttcttcaagatggtacaggaaaatcagtacaaaatacaataccgtgtgatgttggca
cgctatcgtggaaaaacgctttgtccaaagtgccacggtacccgtctgaagcccgaagcc
agctatgtacgggtaggcggtcgaaatatctccgaacttgtggacttgccgattacggaa
ctgaaaactttcttcgataaccttcaactggataagcatgatacggatgttgccacccgt
atcctaacggaaatcaacagtcgcatccgcttccttctcgatgtaggattgggatatctg
acattaaaccgcctcagcaattcgctttccggtggtgaaagtcaacgcatcaatctcgcc
acttcattaggcagtagcctggttggctcactctacattcttgatgaaccaagtatcggg
ttgcatagccgcgatacagataagctgatccatgtattacgtcaattacaacaattgggt
aatacggttgtcatcgtggagcatgacgaggaaattatccgtgcagcagattacattata
gatatcggaccaaaagccggacgtctgggcggacaggttgtctaccagggagatatgaaa
gatttgcaaccgaatagtgatagttacacagtacgttatctgctgggagaagaagaaatt
cccgttccggaacaccgtcgtccatggaataattacatagaactgaccggagcccgcgag
aataacctgaaaggagtaaacgtacgtttcccgctaaacgtgatgaccgtagtaactgga
gtcagcggttccggtaagagtactctggtacgtgacattttcttccgtgccctgaagcgc
gaactggacgaatgcagtgaacgcccgggtgaattcgcttctatcggtggtgacctgcaa
aatctacggaacgtagaatttgtagaccagaaccccattggtaaatccagtcgttcgaat
cccgtgacatatatcaaagcttacgatgaaattcgtaaattatgggcagaacaaccgctt
gccaagcaaatgggatacaccgcaggttacttctcattcaacagtgaaggcggacgttgc
gaagagtgtaaaggtgacggaaccatcacagtagaaatgcaatttatggccgatttggtt
ctggaatgtgaaacctgccacggtaaacgcttcaaagcagatacactggaagtaaagttc
catgatgccaatatatatgatgtactggaaatgaccgtaaatcaggccgtggagtttttc
accaaacacggacaaaagaagattgtgaagaaacttgctccattgcaagatgtgggattg
gggtatatcaaactgggacaatcttcctccaccctttcaggtggtgaaaaccagcgtgtg
aaactggcttactacctcagtcaggagaaagcagaccccaccctgtttatctttgatgaa
ccgaccacgggattgcacttccatgacatccgtaaactgctggaagcattcgatgcattg
atattacgtggacactccattgtaatcattgaacacaacatggatgttatcaaatgtgcc
gactacgtgatagacctcggaccggaaggcggtaataaaggtggaaatctggtggcggca
ggtacaccggaggaagtagcgcgatgtgcagaaagctatacgggtcaattcctacaagag
aaattacacatgaaataa

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