Bacillus spizizenii T30: BIS30_02305
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Entry
BIS30_02305 CDS
T05513
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bit
Bacillus spizizenii T30
Brite
KEGG Orthology (KO) [BR:
bit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bit03019
]
BIS30_02305
03009 Ribosome biogenesis [BR:
bit03009
]
BIS30_02305
Enzymes [BR:
bit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BIS30_02305
Messenger RNA biogenesis [BR:
bit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BIS30_02305
Ribosome biogenesis [BR:
bit03009
]
Prokaryotic type
rRNA helicases
BIS30_02305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
PhoH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJW84093
LinkDB
All DBs
Position
complement(395595..396911)
Genome browser
AA seq
438 aa
AA seq
DB search
MKETKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLL
PLLNKIDPAKDVVQVVITAPTRELANQIHQEALKITQGEEGSQIRSKCFIGGTDKQKSID
KLKIQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFIADVDYIGSRMPED
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRDKDKLLFDIM
SHLNPYLGIVFANTKNTADHIAQYLTGKGLKIGLLHGGLTPRERKKVMKQINDLEFTYVI
ATDLAARGIDIKGVSHVINYELPDDLDFYIHRVGRTARAGSSGQAMTIYELSDEDALARL
EKMGIEFDYLELEKGEWKKGDDRQRRKKRKKTTNEADEIAHRLVKKPKKVKPGYKKKMSY
EMEKIKKKQRRNQSKKRK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacgaaatttgaactttatgaattgaaaccatttattatagatgcagtacac
cgccttggtttttacgaaccgactgatattcagaaaaggctgattcctgcagtgttaaaa
aaagagagcgtgatcggccagtcacagacgggaactggaaagacacacgcttatttactg
cctttattaaacaaaatcgatcctgccaaggatgtcgtgcaggttgtcattacggctccg
actagagagcttgccaaccagattcatcaggaagcgcttaaaatcacacagggtgaggaa
ggcagccagattcgctcgaaatgttttatcggaggcacagataaacaaaaatcgattgat
aaactgaagatacagccgcatcttgttgtcggtacgcccggacggattgctgatttaatc
aaagaacaggcattaagtgttcataaagcggaatctctcgtcattgatgaagcggattta
atgctggacatgggatttattgcagatgtagattacattggttcccgcatgcctgaggat
ctgcagatgcttgtgttctcagcgacgattccggaaaagctgaaaccatttttgaaaaaa
tatatggaaaatccgaaatacgcccacgtggagccaaaacaggtgactgctgcgaaaatc
gagcatattctcattccttcgaaacatcgtgacaaggacaagctcctttttgacatcatg
tctcatctgaatccatacttgggcattgtgtttgccaatacgaaaaacactgctgaccat
atcgctcaatatttaactggaaaaggtctgaaaatcgggctgctgcacggcggattaacg
cctcgtgagcggaaaaaagtcatgaagcagatcaatgatttggaattcacttatgtcatt
gcaactgatcttgccgcaagaggcattgatattaaaggtgtcagtcatgttatcaactat
gagctgccggatgatctcgatttctatattcaccgtgtgggcagaacggctcgcgccggc
tcatcagggcaagcgatgaccatttacgagctttctgatgaggatgcattagccagactt
gagaaaatgggcatcgaatttgattacttagagcttgaaaagggcgagtggaaaaaaggc
gatgaccgccagcgccgcaaaaaacgcaaaaaaacgacgaacgaagcggatgaaattgcg
catcgtcttgtgaaaaagccgaaaaaggtaaaacctggatataaaaagaaaatgagctac
gagatggagaaaatcaagaaaaaacagagaagaaaccaatctaaaaaaagaaagtag
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