Bacillus spizizenii T30: BIS30_06350
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Entry
BIS30_06350 CDS
T05513
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bit
Bacillus spizizenii T30
Pathway
bit03420
Nucleotide excision repair
bit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BIS30_06350
03430 Mismatch repair
BIS30_06350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bit03400
]
BIS30_06350
Enzymes [BR:
bit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BIS30_06350
DNA repair and recombination proteins [BR:
bit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BIS30_06350
MMR (mismatch excision repair)
Other MMR factors
BIS30_06350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
AAA_30
Viral_helicase1
SLFN-g3_helicase
AAA_16
DEAD
nSTAND3
NACHT
NPHP3_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
AJW84805
LinkDB
All DBs
Position
complement(1170595..1172919)
Genome browser
AA seq
774 aa
AA seq
DB search
MNQQDKEWKEEQSRIDEVLQELGKKERFLETSAGGLKHDIIGLRKSFWEDVTVNLDDAHE
AVETMASIKQQAELLSDRERNHRRMDQQLKRIHQLKASPYFGRIDFIENGEEQAERIYIG
LASCMDEKEEQFLIYDWRAPISSMYYNYSPGKADYEVPGETIEGEMVLKRQFIIKNGTLK
AMFNTDMTIGDEMLQEVLSHQSDTQMKNIVSTIQKEQNQIIRNEKSKFLIVQGAAGSGKT
SAALQRVAYLLYRHRGVIDAGQIVLFSPNFLFNSYVSSVLPELGEENMEQATFQEYIEHR
LGRKFQCESPFDQLEYCLTEKKDGDFPSRLSAITWKAGLSFQQFIDEYVSQLSSEGMIFK
NIIFRGQKLINKEQIQSYFYSLDQGQSIPNRMEQTARWLLSELNKLEKKERRKDWVVQEA
ELLDKEDYLDVYKKLQERKQFSESTFNDYQREQQLLAAIIVKKAFKPLKQAVRLLAFLDV
TQLYLQLFSGWGGKFQHEETAMIGELTRLAFAENKLLYEDAAPFLYMQDLIEGRKKNTKI
KHLFIDEAQDYSPFQMTYMRSIFPSASMTVLGDINQSIYAHAIHGVKRMDACFEGEPAEY
VRLKRTYRSTRQIVELTKAMLQDGADIEPFNRNGEIPLIFKTEGREDLCQKLTKEIDRLK
KQGHETIAVICKTAQQCIQAHAHMSEYIDVRLIHKENQTFQKGVCVIPVYLAKGIEFDAV
LVYDASEEHYHTEHDRRLLYTACTRAMHMLTVFYTGEASPFVTVVPPHLYQSAE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcaggataaggaatggaaggaagagcagtcaagaatagatgaggtgctgcag
gagctcggcaaaaaagagcggtttctcgaaacgtctgcaggcgggttaaagcatgacatt
atcggattaagaaaaagcttttgggaggatgttacggttaatcttgatgatgcccatgaa
gcggttgaaacgatggcaagcattaagcagcaggcagagctactgtctgatcgggaacgg
aatcatcggcgtatggatcagcagctcaaacgaattcatcaattaaaagcatcgccttat
ttcggccggattgatttcattgaaaacggcgaggagcaggcagagcgaatttatatcggt
ttagcttcttgtatggatgagaaggaggaacaatttctgatctatgactggagggcgcca
atatcaagtatgtactacaattattccccaggaaaagcggattatgaagtgcccggcgaa
acgatagaaggggaaatggtgctgaaacgccagtttatcatcaaaaacggcactcttaag
gcgatgtttaacactgatatgacgattggcgatgaaatgctgcaagaggtattaagccat
cagtctgatacccaaatgaaaaacatcgtgtccacgattcagaaagaacaaaatcagatt
atccgtaatgaaaaaagcaaatttctgatcgtacagggagcggccgggagcggaaaaaca
tcggcagcgcttcagcgtgtcgcttatttgttatacaggcaccgcggcgtcattgatgcc
ggacaaatcgttttattttctcctaacttcttatttaacagctatgtctcctctgttttg
cctgaattaggagaagagaatatggagcaggcgacgtttcaggaatatattgagcatcgg
cttggccgcaagtttcaatgtgaaagcccctttgatcagctcgaatattgcctgaccgaa
aaaaaggatggcgattttccttcaagactttcggcaatcacatggaaggcaggcttatct
tttcagcaattcattgatgaatacgtcagccaactgtcctctgaagggatgatctttaaa
aacatcatcttccgcggacaaaaactgatcaataaggaacagattcaatcctatttttac
tcactggatcaaggccagtccattccaaaccggatggagcaaacggcgaggtggctgctg
agtgagctgaacaagcttgagaaaaaggaacggcgtaaggattgggtcgttcaggaagct
gagctgctcgacaaagaggattacttggacgtatacaaaaaactgcaggaaaggaaacag
ttcagtgagagcacatttaacgattatcaaagagagcagcagctccttgccgccatcatt
gtgaaaaaggccttcaaaccgctcaaacaggcggtcagactccttgcatttcttgatgtt
acacagttgtatctgcaattgttttctggctggggagggaaatttcagcatgaggagacg
gcaatgataggagagctgacccgattggcatttgcggaaaataaattgctctatgaggac
gcggcaccgtttctttatatgcaggatctgattgaaggcagaaagaaaaatacgaagatc
aaacatctttttatcgacgaagctcaggactattcaccgtttcagatgacttacatgaga
agcatttttccgtctgccagcatgacggtgctcggtgatatcaatcagtccatttacgcc
catgccatacatggcgtaaagcgtatggatgcgtgctttgaaggtgagccggctgaatat
gttcgtttaaagagaacgtacagatcgacaaggcagattgtcgagttaacaaaagcgatg
cttcaggacggagcggatattgagccttttaacaggaacggggaaatacctctcattttc
aaaaccgaaggacgtgaggacctttgtcaaaaactcacgaaagaaattgaccggcttaag
aagcaagggcacgaaacgatagccgtcatttgcaagactgcgcagcaatgcatacaggcg
cacgctcacatgagcgaatatatagatgttcgtctgattcataaagaaaatcaaacattc
caaaagggagtttgtgtcattccagtgtatttagcgaagggaattgagtttgacgcagtg
cttgtctatgatgcatcagaagaacattatcatacagagcacgaccgcaggctgttatat
actgcctgtacccgagcaatgcatatgctgacggtattttatacaggtgaagccagtccg
tttgtaacagttgtgccgcctcacttatatcagagtgctgaatga
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integrated database retrieval system
