Entry |
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Name |
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KO |
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Organism |
bit Bacillus spizizenii T30
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:bit00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BIS30_09345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bit03019]
BIS30_09345
03009 Ribosome biogenesis [BR:bit03009]
BIS30_09345
Enzymes [BR:bit01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BIS30_09345
Messenger RNA biogenesis [BR:bit03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BIS30_09345
Ribosome biogenesis [BR:bit03009]
Prokaryotic type
rRNA helicases
BIS30_09345
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(1773689..1775128)
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AA seq |
479 aa
MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPL
CELADWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATSVFGKSSFDKQKAELKQK
SHMVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTML
FSATLPEDIEKLSRQYMQNPQHIEIKAAGLTTKNIEHAVIQVREENKFSLLKDVLMTENP
DSSIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVA
ARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVTAFEKRFLADIEEYIG
FEIQKIEAPSQEEVARKKPEFLAKMNDRPESKKDKSEELNKDIMKLYFNGGKKKKIRAVD
FVGTIAKIDGVSADDIGIITIMDNASYVEILNGKGPHVLKVMKDTTVKGKKLKVNKANK |
NT seq |
1440 nt +upstreamnt +downstreamnt
atgagtcattttaaaaactatcaaatcagtcatgacattttacgagcattagaaggactg
ggatatacagaaccgaccaaggtgcagcaaagcgtgatccccgctgcccttgaacgaaaa
gatcttgtcgtcaaatcacagactggaagcgggaaaacggcttcgttcgggattcctctc
tgtgagctggcggattgggatgaaaacaagccacaggcgcttattttaacaccgacccgt
gagcttgccgtacaagtaaaagaggatatcacgaacatcggacgatttaaacgaatcaaa
gcgacatccgtgtttggaaaatcatcctttgacaaacaaaaagctgagcttaaacaaaaa
agccacatggttgtcggcacgccgggacgtgtactggatcatatcgaaaagggcacgctg
ccgttagaccgtctctcctatttggtcattgatgaagccgatgagatgctgaatatgggc
ttcatcgagcaagtagaggcgattatcaagcatctgccgacagagcgcacgacgatgttg
ttttcggcaacgctgccggaggatattgagaaattgagccgtcaatatatgcaaaacccg
cagcatattgaaatcaaagcggccggcctaaccacaaagaatattgaacatgcggtgatt
caagtaagagaagagaataagttttctttgctgaaagatgtgctgatgacggagaatccc
gacagctccatcattttctgccggacgaaagagcatgtcaatcagctgaccgatgaattg
gatgacttaggatatccatgcgataaaattcacggcggaatgattcaggaagaccggttc
gacgtcatgaatgaatttaaacggggcgagtatcggtacctagttgcaacagatgtcgcc
gcgcgcgggattgatattgaaaatatctcccttgtcatcaactacgatctgccgcttgaa
aaggaaagctacgtccaccgcacgggccggacggggcgtgcaggaaacaaaggaaaagcc
atttcgtttgtcacggccttcgaaaaacggtttttagccgacattgaagaatatatcgga
tttgaaatccaaaaaatagaagctccttctcaagaggaagtggcaaggaagaaacctgaa
tttctagctaaaatgaatgaccgtccggaaagcaaaaaggacaaaagcgaagaactgaat
aaagacattatgaagctgtattttaacggcggaaagaaaaagaaaatcagagccgttgat
tttgtaggaacgattgccaaaattgacggtgtgtcagctgatgacatcggcattatcacg
atcatggataacgcctcttacgtggagattttaaacggaaaaggccctcatgttctcaaa
gtgatgaaggatacaaccgtcaaagggaaaaagctcaaggtgaataaagcgaataaatga |