Bacillus spizizenii: BIS30_16035
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Entry
BIS30_16035 CDS
T05513
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bit
Bacillus spizizenii
Brite
KEGG Orthology (KO) [BR:
bit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bit03400
]
BIS30_16035
DNA repair and recombination proteins [BR:
bit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BIS30_16035
Archaeal homologous recombinant proteins
BIS30_16035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Exotox-A_target
ABC_tran
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AJW86524
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All DBs
Position
3080927..3084319
Genome browser
AA seq
1130 aa
AA seq
DB search
MKPIVLSIKGLHSFREEQTIDFEGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA
NNTHGILNHAEDTLSVSFTFALQTNHQISYKVERVFKRTDEMKVKTALCRFIEIRDEHTV
LADKASEVNKRVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRHMLQRLFNLEQYGD
RLVKKLRRQAQEANARKNEMLAEQSGLGEASSEAVEQAEQALEQAEARLEAMRKNRDQAK
ERFTEYQEIWNVQKEKAAYEEEKKRLEKEQLHVDSMKKRLLEAETAAALKPYADRYAEAI
QHEEKAEKEQTLAQKDLADRTAFFHQKHEEYEEWRQHKSGKEPELLTEQEQLSRLQEIEV
KLSEAKQDEERKKAELQQKEEALQSVMNELETVTDRLTRGQNRQTELKQQLKSLQVTSDE
RKSCQQAAEMALRIRQTEEQIRKEKKRSDALNLVLQKMNEEKSTLVQKTEAEKSNIIQAY
EAVQTVYHMVCETERSLTRMTEQAKKRQQTLHSQREKARMALLTKELAEKLTAGKPCPVC
GSTHHDPSASVHETYELDSNLEKNIKQTDVLLTEAAALSQEILSAKITLEEQSARFIEQC
PFLQTIQAPNLEAAASYENQPVQEAFDTATIEWKQVKQDILSVKTRMAQVISAYQESLKT
ADQLNEKIGFEQREADRIDSIIAELQSSMDSRLKMFKEAFQDQSVNEAEKWQQAIEEKDR
AAEECEKRIEKSIAFLAEHEAQKEKLRESGHQLEREKLELHYAAERIKSVIADYEHELGD
YAKGDSIQIKLRSVQQDLKLLKEKEQSLYEELQSAQTMLNQAKSRASASELTLKEAKDRL
EKAEAAWLEHAKSTRFTRTEEVERSLIPDAELEKMKAGIDQFMDKLKQNAANLERVAEIL
AGRALSESEWSETVTALQEAEDAFGAAIEEKGAAAKALAVIRDHHKRFNEIEAELKKWQT
HIDRLDKLQAVFKGNTFVEFLAEEQLESVARDASARLGMLTRQRYAIEVDSEGGFVMRDN
ANGGVKRPVSSLSGGETFLTSLSLALALSAQIQLRGEYPLQFFFLDEGFGTLDQDLLDTV
VTALEKLQSDNLSVGVISHVQELRARLPKKLIVHPAEPSGRGTRVTLELM
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatcgtcttaagcattaaagggctccacagctttagagaggagcagacgata
gattttgagggtctttccggtgccggtgttttcggcattttcggcccgacaggaagcggt
aaatcctctatcctcgatgcaatgacgcttgctttatacggaaaggtggagcgggcggcg
aataatacgcacggaattttaaaccatgcggaagatacgctgtctgtttcctttaccttt
gcgcttcagacgaatcatcaaatctcttacaaagtcgaacgtgtttttaagagaacggat
gaaatgaaggtgaaaacggcactttgccgcttcatcgaaatcagggacgagcatacggtg
ctggcggataaagccagcgaagtgaataaaagagtggaggagcttttggggctgacgatc
gacgactttacgagagcggtggtcctgccgcaaggaaaatttgctgaatttctgtcttta
aaaggggcggagcggagacatatgcttcagcgtttatttaatttggagcagtatggagac
cggcttgtgaaaaagctgagacggcaggcacaggaagccaatgcgagaaaaaatgaaatg
cttgctgaacagtccggtcttggtgaggcaagttcagaagcggttgagcaggcggaacag
gctctcgaacaagcagaagcacggctggaagcgatgagaaagaatcgtgatcaggcaaaa
gagcggtttacggagtatcaggagatttggaatgtccaaaaggaaaaagccgcttatgag
gaagagaaaaaacgtctcgaaaaagaacagctgcacgtagacagcatgaaaaagcgtctg
ctggaagccgaaacagccgccgctctcaagccctatgcggaccggtacgcagaagcaatc
cagcatgaggaaaaagctgaaaaggaacaaacgcttgctcaaaaggatttagcagaccgg
accgctttctttcatcaaaaacatgaagagtatgaagagtggcgccagcataaaagcggg
aaagagcctgagcttttaactgagcaggaacagctttcccgtttgcaggagatcgaagtc
aaactgagtgaggccaagcaagacgaagagcgcaaaaaggctgaactccagcagaaagaa
gaggcccttcaatctgtcatgaatgaattggagactgtaacagaccgtctgacacgaggg
caaaacagacagacggaattgaagcagcagctaaaatccctgcaagtgacatccgatgag
cgaaaaagctgccagcaggccgcagaaatggcattgcgcatcagacagactgaagagcaa
attagaaaagagaaaaaacgaagtgacgcattgaacctcgtgcttcagaagatgaatgag
gagaaaagtacactcgttcaaaagacggaagcggaaaaaagcaacatcattcaggcatat
gaggctgtacaaactgtgtaccatatggtgtgtgagacggaacgttcattaacacgtatg
actgagcaggctaaaaagagacagcaaacgcttcactcgcagcgtgaaaaagcaagaatg
gcgctgctcacaaaagagttagccgaaaagctgaccgccggaaagccctgcccggtctgc
ggttcaacccatcatgatccgtctgcctcagtacatgaaacatatgagctcgacagcaat
cttgaaaagaacatcaaacagacggatgtgttattgacggaagcggcagcactcagccag
gagattctttcagccaaaattacgcttgaagaacagtccgcgcgctttattgaacagtgt
ccgtttttgcaaacgatccaagcaccgaaccttgaagcggcagcttcttacgagaaccag
ccggtgcaggaggcattcgatactgccacaattgaatggaaacaagtcaaacaggatatt
ctttctgttaaaacacgaatggcacaagtgatcagcgcctatcaggagtctttaaaaacg
gccgatcagcttaatgaaaaaatcggttttgaacaaagagaggctgaccggattgacagt
atcatcgctgagcttcagtcctcgatggacagccgcctgaaaatgtttaaagaagcgttt
caagatcagtctgtgaatgaagcggaaaaatggcagcaagccattgaagaaaaggatcgg
gctgcagaagaatgtgaaaaacggattgagaagagcatcgcgtttcttgctgagcatgaa
gcacaaaaggaaaagctgcgggaatcgggacaccagcttgaacgggaaaagctggagctt
cattatgcggctgaacgcatcaagagcgtgatagctgattatgagcatgagctcggagat
tacgcaaaaggagattcgatccaaatcaaactccgctctgtccagcaggatctaaagctg
ttaaaggaaaaagagcaatctctgtatgaagaactgcaaagcgcccaaacgatgctcaat
caggcgaaaagccgcgcttcagcaagcgagctcacccttaaagaggcgaaggacagattg
gaaaaagcggaagctgcttggcttgagcatgcgaaaagcacccgttttacccggactgaa
gaggtggagcgaagtctcatcccagacgctgaacttgaaaagatgaaagcgggcatagat
cagtttatggataaactgaagcaaaatgctgcaaacttagaacgagttgcagagatactt
gccggcagagccttatcagagagcgaatggagcgaaaccgttacggcattacaagaagct
gaggacgcatttggcgctgctatagaggaaaaaggcgcagcagcgaaagcgctggccgtc
attcgcgaccatcataaacggtttaacgaaattgaagctgaactgaagaaatggcagaca
catatcgacaggctggacaagctgcaagctgtgtttaaaggcaataccttcgttgaattt
ttagcagaggagcagcttgaaagcgttgcgcgggacgcatcagcaagacttggcatgctg
acgagacagcgctatgccatcgaagtggattcagaaggcggattcgtgatgcgggataat
gcgaatggaggcgtcaaacgcccggtatccagcttgtctgggggagagaccttcctcacc
tcgctttctcttgctctagcgctgtctgcgcagatccagcttcgcggagaatacccgctc
cagttctttttcttagatgaagggttcggcaccctggatcaagatttgcttgatacggtt
gtgacagccttggaaaaactgcagtcagacaacctgtctgtcggtgtcatcagccatgtg
caggaactgcgggcacggcttccgaaaaagctgatcgtccatccggctgaaccgagcggc
cgcggaacacgggtaacacttgagttgatgtaa
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