Bacillus spizizenii T30: BIS30_19205
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Entry
BIS30_19205 CDS
T05513
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bit
Bacillus spizizenii T30
Pathway
bit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BIS30_19205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bit03019
]
BIS30_19205
03016 Transfer RNA biogenesis [BR:
bit03016
]
BIS30_19205
Enzymes [BR:
bit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BIS30_19205
Messenger RNA biogenesis [BR:
bit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BIS30_19205
Transfer RNA biogenesis [BR:
bit03016
]
Prokaryotic type
tRNA degradation factors
BIS30_19205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
KorB
Motif
Other DBs
NCBI-ProteinID:
AJW87121
LinkDB
All DBs
Position
3669746..3671863
Genome browser
AA seq
705 aa
AA seq
DB search
MGQEKHVFTIDWAGRTLTVETGQLAKQANGAVMIRYGDTAVLSTATASKEPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFADGFRNEVQVISIVMSV
DQDCSSEMAAMFGSSLALSVSDIPFEGPIAGVTVGRIDDQFIINPTVDQLEKSDINLVVA
GTKDAINMVEAGADEVPEETMLEAIMFGHEEIKRLIAFQEEIVAAVGKEKSEIALYEIDE
ELSDKVKALAEEDLLKAIQVHEKHAREDAINEVKNTVVAKFEDEEHDEDTIKQVKQILSK
LVKNEVRRLITEEKVRPDGRGVDQIRPLSSEVGLLPRTHGSGLFTRGQTQALSVCTLGAL
GDVQILDGLGVEESKRFMHHYNFPQFSVGETGPMRGPGRREIGHGALGERALEPVIPSEK
DFPYTVRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEHYTVLT
DIQGMEDALGDMDFKVAGTDKGVTALQMDIKIEGLSREILEEALQQAKKGRMEILNSMLA
TLSESRKELSQYAPKILTMAINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTIFISS
TDESSNQKAQKIIEDLVREVEVGQLYLGKVKRIEKFGAFVEIFSGKDGLVHISELALERV
GKVEDVVKIGDEILVKVTEIDKQGRVNLSRKAVLREEKEKEEQQS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagaaaaacatgtctttaccatagattgggccggaagaacgcttaccgttgaa
accggccagcttgccaaacaggcaaacggtgctgtgatgatccgctacggtgataccgca
gtacttagtacagcaaccgcttcaaaagaaccaaaaccgcttgatttcttcccgcttact
gtaaactatgaggaaagattatatgcggtaggaaaaattccgggcggatttattaaaaga
gaaggacgtccaagtgaaaaagcggttcttgccagccgtttaatcgaccgtccgatccgt
cctttgtttgcagatggattccgtaatgaagttcaagttatcagcattgtcatgagtgtt
gaccaagactgctcttctgaaatggctgccatgttcggttcatctcttgctctatctgta
tcggatattccgtttgaaggaccaattgcaggggttactgtcggacgcattgatgatcaa
tttatcattaacccgacagtcgatcagcttgagaaaagcgatatcaatcttgtcgttgcc
ggcacgaaagatgccattaacatggtagaagcgggagcggacgaggttcctgaggaaact
atgcttgaagccattatgtttggccatgaagagattaaacgcctgattgcattccaagaa
gaaattgtagcagcagtcggcaaagagaaatcagaaattgcgctttatgaaattgatgaa
gagcttagtgataaagtaaaagctttagcagaagaagatctgttgaaggctatccaagtt
catgaaaagcatgctcgcgaagatgccattaatgaagtgaaaaacacagttgtggcaaaa
ttcgaggatgaagagcatgatgaagacacaatcaagcaagtgaagcagattttatccaag
ctggtgaaaaatgaagtgcgccgcctgataactgaagagaaagtaagaccggacggccgc
ggtgtcgatcaaatccgcccgctttcttctgaggtcggcctcttgccaagaacgcacggg
tcaggtctgtttacaaggggacaaacacaggccctaagcgtatgtacgttaggtgctcta
ggagatgtgcaaattcttgacggcttaggtgttgaagagtcaaaacggtttatgcatcac
tataacttcccgcaattcagcgttggggaaacaggaccaatgcgtgggccgggacgccgt
gaaatcggacacggagcactgggtgagcgtgcgcttgagccagttattccgtctgaaaaa
gacttcccttacactgtccgtcttgtatcagaagtgcttgaatcaaacggttctacgtct
caagcaagtatttgcgcaagcacacttgcaatgatggatgccggtgtaccaatcaaagcc
ccagttgcgggaattgcgatgggtcttgtcaaatcaggcgaacattatactgttctgact
gacattcaaggcatggaagacgcgcttggagatatggactttaaagtagccggaacggat
aaaggcgtaacagcgctgcaaatggacattaaaatcgaaggcctttccagagagattctt
gaagaagcacttcagcaggcaaaaaaagggagaatggaaattctcaacagcatgctagcg
acattaagcgaatcaagaaaagagctttctcaatatgcgcctaagattttaacaatggcc
attaatcctgataaaatccgcgatgtcatcgggccgagcggaaaacaaatcaataagatc
atcgaagaaaccggtgttaaaattgatattgagcaggacggcacaatctttatttcttca
acagatgaaagcagcaaccaaaaagcgcaaaaaatcatcgaagaccttgtcagagaggtt
gaagtcggccagctttacctaggtaaagtgaaacgaatcgaaaaattcggggctttcgtt
gaaattttcagcggaaaagacggtttggtgcacatttcagagcttgcgcttgaacgcgta
ggaaaagttgaagatgttgtgaaaatcggagacgagattcttgtcaaggtcactgaaatt
gataaacaaggacgagtcaatttgtcccgtaaagcggtgctccgtgaagagaaagaaaaa
gaagaacaacaatcttaa
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